Factsheet for HORVU6Hr1G092950.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G405900.1	Wheat	cytosol	71.43	80.84
EES04388	Sorghum	cytosol	71.43	78.95
Zm00001d050635_P001	Maize	plastid	70.9	78.36
Zm00001d016661_P001	Maize	plastid	70.37	77.33
Zm00001d016660_P001	Maize	cytosol	70.37	77.33
EES05164	Sorghum	cytosol	70.37	77.33
KRH24153	Soybean	endoplasmic reticulum, mitochondrion, nucleus	67.72	74.42
Bra037296.1-P	Field mustard	cytosol	67.2	74.27
Bra011568.1-P	Field mustard	cytosol	67.2	74.27
CDY47469	Canola	cytosol	67.2	74.27
CDX69094	Canola	cytosol	67.2	73.84
VIT_03s0038g01930.t01	Wine grape	cytosol	67.2	73.84
Bra010728.1-P	Field mustard	cytosol	67.2	73.84
CDY12100	Canola	cytosol	67.2	73.84
CDX90292	Canola	cytosol	67.2	73.84
CDY26779	Canola	cytosol	66.67	73.68
VIT_18s0001g14400.t01	Wine grape	extracellular	66.67	73.26
AT4G38740.1	Thale cress	cytosol	66.67	73.26
KRH60719	Soybean	cytosol, endoplasmic reticulum, mitochondrion	66.67	73.26
KRH51416	Soybean	cytosol	66.67	73.26
Solyc01g111170.2.1	Tomato	extracellular, nucleus	66.14	73.1
PGSC0003DMT400004125	Potato	extracellular	66.14	73.1
GSMUA_Achr3P12630_001	Banana	plasma membrane, unclear	58.2	72.85
CDY22414	Canola	cytosol, extracellular	65.61	72.09
Bra033574.1-P	Field mustard	cytosol	65.61	72.09
CDX72741	Canola	cytosol	65.61	72.09
Solyc10g054910.1.1	Tomato	extracellular, unclear	65.61	72.09
PGSC0003DMT400011344	Potato	cytosol	65.61	72.09
AT2G21130.1	Thale cress	cytosol	65.61	71.26
KRH29120	Soybean	endoplasmic reticulum, nucleus	64.55	70.93
AT2G16600.1	Thale cress	cytosol	64.55	70.52
AT4G34870.1	Thale cress	cytosol	61.9	68.02
HORVU6Hr1G012570.2	Barley	cytosol	74.07	67.96
TraesCS6B01G450300.1	Wheat	cytosol	76.19	65.75
TraesCS6A01G405800.1	Wheat	cytosol	78.31	59.92
TraesCS6B01G450400.1	Wheat	cytosol	69.31	59.82
HORVU4Hr1G000910.3	Barley	cytosol	61.38	58.29
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	60.32	52.78
HORVU7Hr1G095720.2	Barley	mitochondrion	60.32	52.29
HORVU5Hr1G111410.1	Barley	plastid	50.79	48.48
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	52.38	45.83
HORVU3Hr1G030750.1	Barley	plastid	50.26	39.58
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	55.56	37.37
HORVU7Hr1G036160.1	Barley	cytosol	55.56	27.63
HORVU6Hr1G077290.1	Barley	plastid	54.5	22.64
HORVU2Hr1G056230.1	Barley	nucleus	50.79	15.48
HORVU6Hr1G037500.21	Barley	nucleus	47.62	10.94

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287V7S6	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G092950	EnsemblPlants:HORVU6Hr1G092950.1	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF403	SUPFAM:SSF50891
SignalP:SignalP-noTM	UniParc:UPI000B47FCB9	SEG:seg	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287V7S6]

Coordinates

chrchr6H:+:578546655..578547226

Molecular Weight (calculated)

20428.5 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.099

Length

189 amino acids

Sequence
(BLAST)

001: VDAHSLLLLP TVFFDVTLGG APAGRIVMRL FTRDVPETAE NFRALCTGEK GVDKSGKPLH YKGSKFHRVI PDFMCQGGDF TRGDGRGGES IYGDRFPDEN
101: FNLKHTKPGM VSIANAGPNT NGSQFFICTV PCPWLDGKHV VFGEVVEGMD VVFGEVVEGM DVVRNIEKVG SRSGTCAKYV VVADCGQLP

Best Arabidopsis Sequence Match ( AT2G16600.1 )
(BLAST)

001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS

Arabidopsis Description

CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.