Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G450300.1 | Wheat | cytosol | 74.09 | 83.56 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 56.28 | 81.29 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 54.66 | 80.84 |
| EES05164 | Sorghum | cytosol | 55.47 | 79.65 |
| Zm00001d050635_P001 | Maize | plastid | 55.06 | 79.53 |
| EES04388 | Sorghum | cytosol | 55.06 | 79.53 |
| Zm00001d016661_P001 | Maize | plastid | 54.66 | 78.49 |
| Zm00001d016660_P001 | Maize | cytosol | 54.66 | 78.49 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 59.92 | 78.31 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 52.63 | 76.02 |
| PGSC0003DMT400004125 | Potato | extracellular | 51.82 | 74.85 |
| CDY47469 | Canola | cytosol | 51.82 | 74.85 |
| Bra037296.1-P | Field mustard | cytosol | 51.82 | 74.85 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 51.82 | 74.42 |
| CDY26779 | Canola | cytosol | 51.42 | 74.27 |
| Bra011568.1-P | Field mustard | cytosol | 51.01 | 73.68 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 51.01 | 73.26 |
| PGSC0003DMT400011344 | Potato | cytosol | 51.01 | 73.26 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 51.01 | 73.26 |
| KRH51416 | Soybean | cytosol | 51.01 | 73.26 |
| Bra010728.1-P | Field mustard | cytosol | 51.01 | 73.26 |
| CDY22414 | Canola | cytosol, extracellular | 51.01 | 73.26 |
| CDY12100 | Canola | cytosol | 51.01 | 73.26 |
| CDX90292 | Canola | cytosol | 51.01 | 73.26 |
| CDX72741 | Canola | cytosol | 51.01 | 73.26 |
| Bra033574.1-P | Field mustard | cytosol | 51.01 | 73.26 |
| AT2G21130.1 | Thale cress | cytosol | 51.42 | 72.99 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 44.53 | 72.85 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 50.61 | 72.67 |
| AT4G38740.1 | Thale cress | cytosol | 50.61 | 72.67 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 50.61 | 72.67 |
| CDX69094 | Canola | cytosol | 50.2 | 72.09 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 50.2 | 72.09 |
| AT2G16600.1 | Thale cress | cytosol | 49.39 | 70.52 |
| AT4G34870.1 | Thale cress | cytosol | 47.77 | 68.6 |
| TraesCS4A01G312600.1 | Wheat | cytosol, mitochondrion, plastid | 46.96 | 64.44 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 46.96 | 53.21 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 39.27 | 48.99 |
| TraesCS5A01G328900.1 | Wheat | endoplasmic reticulum | 37.25 | 42.59 |
| TraesCS1A01G007500.1 | Wheat | golgi | 42.11 | 42.45 |
| TraesCS3A01G151100.1 | Wheat | plastid | 40.08 | 41.25 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 42.51 | 27.7 |
| TraesCS6A01G313700.1 | Wheat | cytosol | 43.72 | 26.6 |
| TraesCS2A01G237700.1 | Wheat | nucleus | 40.49 | 15.55 |
| TraesCS6A01G176900.1 | Wheat | nucleus | 37.65 | 11.3 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001810 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PFAM:PF00646 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 |
| PANTHER:PTHR11071 | PANTHER:PTHR11071:SF403 | SMART:SM00256 | SUPFAM:SSF50891 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS6A01G405800 |
| EnsemblPlants:TraesCS6A01G405800.1 | TIGR:cd01926 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:611535921..611536664
Molecular Weight (calculated)
26936.7 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.100
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFVSLYRS QHLRLPRADR SARLPAGHME GTNSDGNGMC FSYDVLLGIL RRLPCNAIAK SRRVCRAWRA LVDAHNLLQL PTVFFDVTIG GAPAGRIVMR
101: LFAKDVPKTA ENFRALCTGE KGVGKSGKAL HYRGSVFHRV IPGFMCQGGD FTMGNGLGGE SIYGDKFRDE KFVRKHTPGM LSMANAGPNT NGSQFFICTV
201: PCPWLDDKDV VFGEVVEGMD VVRNIEKVGS RSGICTNSVV IADCGQL
101: LFAKDVPKTA ENFRALCTGE KGVGKSGKAL HYRGSVFHRV IPGFMCQGGD FTMGNGLGGE SIYGDKFRDE KFVRKHTPGM LSMANAGPNT NGSQFFICTV
201: PCPWLDDKDV VFGEVVEGMD VVRNIEKVGS RSGICTNSVV IADCGQL
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.