Factsheet for Zm00001d016661_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016660_P001	Maize	cytosol	100.0	100.0
EES05164	Sorghum	cytosol	94.77	94.77
Zm00001d050635_P001	Maize	plastid	94.19	94.74
Os02t0121300-01	Rice	extracellular	87.21	87.21
TraesCS6D01G066700.1	Wheat	golgi, plastid	86.05	86.55
CDX90292	Canola	cytosol	83.14	83.14
CDY12100	Canola	cytosol	83.14	83.14
Bra010728.1-P	Field mustard	cytosol	83.14	83.14
KRH60719	Soybean	cytosol, endoplasmic reticulum, mitochondrion	82.56	82.56
KRH24153	Soybean	endoplasmic reticulum, mitochondrion, nucleus	81.98	81.98
GSMUA_Achr3P12630_001	Banana	plasma membrane, unclear	71.51	81.46
KRH51416	Soybean	cytosol	81.4	81.4
Bra011568.1-P	Field mustard	cytosol	80.81	81.29
CDY47469	Canola	cytosol	80.81	81.29
Bra037296.1-P	Field mustard	cytosol	80.81	81.29
VIT_03s0038g01930.t01	Wine grape	cytosol	80.81	80.81
CDY26779	Canola	cytosol	80.23	80.7
PGSC0003DMT400004125	Potato	extracellular	80.23	80.7
VIT_18s0001g14400.t01	Wine grape	extracellular	80.23	80.23
Solyc01g111170.2.1	Tomato	extracellular, nucleus	79.65	80.12
CDX69094	Canola	cytosol	79.65	79.65
KRH29120	Soybean	endoplasmic reticulum, nucleus	79.65	79.65
AT4G38740.1	Thale cress	cytosol	79.65	79.65
Bra033574.1-P	Field mustard	cytosol	79.07	79.07
CDY22414	Canola	cytosol, extracellular	79.07	79.07
CDX72741	Canola	cytosol	79.07	79.07
PGSC0003DMT400011344	Potato	cytosol	78.49	78.49
Solyc10g054910.1.1	Tomato	extracellular, unclear	78.49	78.49
AT2G21130.1	Thale cress	cytosol	78.49	77.59
TraesCS6A01G405900.1	Wheat	cytosol	75.0	77.25
AT2G16600.1	Thale cress	cytosol	77.33	76.88
AT4G34870.1	Thale cress	cytosol	76.74	76.74
Zm00001d009267_P001	Maize	cytosol	4.65	72.73
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	77.33	70.37
Zm00001d030339_P001	Maize	mitochondrion	63.95	60.11
TraesCS6B01G450300.1	Wheat	cytosol	74.42	58.45
TraesCS6B01G450400.1	Wheat	cytosol	70.35	55.25
TraesCS6A01G405800.1	Wheat	cytosol	78.49	54.66
Zm00001d014732_P002	Maize	mitochondrion	67.44	52.73
Zm00001d022631_P002	Maize	plastid	60.47	48.15
Zm00001d011104_P001	Maize	plastid	63.37	43.95
Zm00001d035761_P001	Maize	plastid	63.95	43.82
Zm00001d036442_P001	Maize	mitochondrion	67.44	41.88
Zm00001d008209_P001	Maize	plastid	62.21	38.08
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	58.14	33.78
Zm00001d037189_P004	Maize	extracellular	66.86	29.56
Zm00001d013010_P002	Maize	plastid	52.33	29.22
Zm00001d007826_P002	Maize	nucleus	61.63	15.82
Zm00001d018944_P004	Maize	nucleus	61.05	14.89
Zm00001d053620_P016	Maize	nucleus	48.84	10.26
Zm00001d015729_P005	Maize	nucleus	48.26	9.66

Protein Annotations

EntrezGene:103627222	MapMan:18.12.1	Gene3D:2.40.100.10	ProteinID:AQK71378.1	ProteinID:AQK71379.1	UniProt:B4FZZ2
EMBL:BT042680	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	EMBL:EU963083
EMBL:EU967603	EMBL:EU976357	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016018
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF403	SUPFAM:SSF50891
UniParc:UPI00017B766E	EnsemblPlantsGene:Zm00001d016661	EnsemblPlants:Zm00001d016661_P001	EnsemblPlants:Zm00001d016661_T001	SEG:seg	:

Description

Peptidyl-prolyl cis-trans isomerase CYP19-1

Coordinates

chr5:+:171745370..171745888

Molecular Weight (calculated)

18363.1 Da

IEP (calculated)

8.947

GRAVY (calculated)

-0.219

Length

172 amino acids

Sequence
(BLAST)

001: MANPRVFFDM TVGGAPAGRI VMELYANEVP KTAENFRALC TGEKGVGKSG KPLHYKGSTF HRVIPEFMCQ GGDFTRGNGT GGESIYGEKF PDEKFVRKHT
101: APGVLSMANA GPNTNGSQFF ICTVATPWLD GKHVVFGQVV EGMDVVKAIE KVGTRNGSTS KVVKVADCGQ LS

Best Arabidopsis Sequence Match ( AT2G21130.1 )
(BLAST)

001: MASHPKVFFD MTIGGAPAGK IVMELYTDKT PKTAENFRAL CTGEKGVGRS GKPLHFKGSS FHRVIPNFMC QGGDFTKGNG TGGESIYGAK FEDENFERKH
101: TGPGILSMAN AGANTNGSQF FICTVKTDWL DGKHVVFGQV VEGLDVVKAI EKIGSSSGKP TKPVVIADCG EISS

Arabidopsis Description

CYP19-2Peptidyl-prolyl cis-trans isomerase CYP19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.