Factsheet for Zm00001d018944_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95944	Sorghum	nucleus	81.28	88.43
Zm00001d007826_P002	Maize	nucleus	81.84	86.12
TraesCS2B01G260600.1	Wheat	nucleus	61.13	67.87
HORVU2Hr1G056230.1	Barley	nucleus	58.87	66.94
TraesCS2D01G244700.1	Wheat	nucleus	60.14	66.67
TraesCS2A01G237700.1	Wheat	nucleus	59.86	65.63
Zm00001d050635_P001	Maize	plastid	15.04	61.99
Zm00001d016660_P001	Maize	cytosol	14.89	61.05
Zm00001d016661_P001	Maize	plastid	14.89	61.05
Zm00001d009267_P001	Maize	cytosol	0.85	54.55
Zm00001d030339_P001	Maize	mitochondrion	13.48	51.91
Zm00001d014732_P002	Maize	mitochondrion	14.33	45.91
AT3G63400.4	Thale cress	nucleus	35.04	43.33
Zm00001d022631_P002	Maize	plastid	13.19	43.06
CDY53714	Canola	nucleus	33.62	42.63
Bra040447.1-P	Field mustard	nucleus	31.77	42.34
GSMUA_Achr5P03050_001	Banana	nucleus	41.28	41.93
PGSC0003DMT400049782	Potato	nucleus	38.87	41.64
KRH67275	Soybean	nucleus	39.01	41.17
Solyc09g065720.2.1	Tomato	nucleus	38.3	40.91
KRG95597	Soybean	nucleus	37.87	40.52
VIT_00s0179g00290.t01	Wine grape	endoplasmic reticulum, golgi	39.86	38.65
CDX93909	Canola	nucleus	33.33	38.4
Zm00001d036442_P001	Maize	mitochondrion	14.18	36.1
Zm00001d035761_P001	Maize	plastid	12.77	35.86
Zm00001d011104_P001	Maize	plastid	12.48	35.48
Zm00001d037189_P004	Maize	extracellular	18.01	32.65
Zm00001d008209_P001	Maize	plastid	12.77	32.03
Zm00001d014731_P017	Maize	endoplasmic reticulum, vacuole	12.62	30.07
Zm00001d013010_P002	Maize	plastid	12.06	27.6
Zm00001d053620_P016	Maize	nucleus	30.35	26.13
Zm00001d015729_P005	Maize	nucleus	30.78	25.26

Protein Annotations

EntrezGene:100274576	MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1D6HTK0	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130
InterPro:IPR029000	ProteinID:ONM51704.1	ProteinID:ONM51710.1	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF396	SUPFAM:SSF50891	UniParc:UPI0008427F8B	EnsemblPlantsGene:Zm00001d018944	EnsemblPlants:Zm00001d018944_P004
EnsemblPlants:Zm00001d018944_T004	SEG:seg	:	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase CYP63

Coordinates

chr7:+:10187355..10193403

Molecular Weight (calculated)

77790.9 Da

IEP (calculated)

10.985

GRAVY (calculated)

-1.211

Length

705 amino acids

Sequence
(BLAST)

001: MPKVKNPHVF MDISIGGGSA ERITFELFAN VVPKTAENFR ALCTAYVRVL SLKPVPCAQH IGERGLGAST QKPLYYKGTY IHRIVKGFVA QGGDFSSGDG
101: KGGESIYGGK FPDENFKLLH NQPGVLSMAN SGPGTNGSQF FITFKALPHL DGYCFLFFSR WALFDSQFSN HNQKLNTARK LINDIVACND LNKHVVFGKV
201: VSGIALLKNL EAAGSETGNP SCQVKIVDCG EVSNTNSQDL LKGEKEKKLR TADGNSNAEG RAKLKKASGD YKQRKKRKHY SSDSYSSDTS DSSSYSSDSG
301: SDSESQSSMN TSSSSDHRRK RRKGSKKDKR KLTKRKGKHT RSKRKSRGSK RRPRRSYGSS SDDSVSSKTD NSSSDSENGG HYTKRSLPKD KESTKMTNSE
401: QGRTFPDVDK VKQTVTTINR SQSHDGSKPS NKDDNGADDR SGNYSSKDRN DPGASSRISP IQTDVNLTKP VNVYGNIGGD NADAGMSITG TERHLPSNEP
501: VSTNGKDLAV GSADNGQPQR IRKGRGFTQK YGFARRYRTP SPERPPVRPR YDGGREDRWN NFNRYGRTGP YSRRSPVRRY HGSPRANSPS RYQRRGRSRS
601: RSPATRHDRG GYRRPSPRRS RSPADPRRDA NDRPRSGHGG GGPDHRGHIP PANNRSRSKS RDPLRSRSPD AAPAKRESSR YNRRRSSSSR SSSPDADGNK
701: GLVSY

Best Arabidopsis Sequence Match ( AT3G55920.1 )
(BLAST)

001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPSVNE KILDAKLNQV GEDLEGVTHK VYFDIQINGS PAGRILIGLF GNIVPKTAEN FRSLCTGEKG
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL

Arabidopsis Description

CYP21-2Peptidyl-prolyl cis-trans isomerase CYP21-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.