Factsheet for HORVU2Hr1G056230.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G260600.1	Wheat	nucleus	91.45	89.29
TraesCS2D01G244700.1	Wheat	nucleus	90.0	87.74
TraesCS2A01G237700.1	Wheat	nucleus	89.68	86.47
EER95944	Sorghum	nucleus	67.9	64.97
Zm00001d007826_P002	Maize	nucleus	66.13	61.19
Zm00001d018944_P004	Maize	nucleus	66.94	58.87
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	15.48	50.79
HORVU4Hr1G000910.3	Barley	cytosol	16.13	50.25
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	17.26	49.54
HORVU7Hr1G095720.2	Barley	mitochondrion	17.26	49.08
HORVU6Hr1G012570.2	Barley	cytosol	15.97	48.06
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	16.29	46.76
HORVU5Hr1G111410.1	Barley	plastid	14.68	45.96
AT3G63400.4	Thale cress	nucleus	39.68	43.16
CDY53714	Canola	nucleus	37.42	41.73
Bra040447.1-P	Field mustard	nucleus	35.32	41.4
KRH67275	Soybean	nucleus	44.52	41.32
PGSC0003DMT400049782	Potato	nucleus	43.71	41.19
Solyc09g065720.2.1	Tomato	nucleus	43.55	40.91
KRG95597	Soybean	nucleus	43.23	40.67
GSMUA_Achr5P03050_001	Banana	nucleus	45.0	40.2
VIT_00s0179g00290.t01	Wine grape	endoplasmic reticulum, golgi	46.13	39.34
CDX93909	Canola	nucleus	36.94	37.42
HORVU3Hr1G030750.1	Barley	plastid	13.71	35.42
HORVU7Hr1G036160.1	Barley	cytosol	20.65	33.68
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	13.87	30.61
HORVU6Hr1G037500.21	Barley	nucleus	38.06	28.68
HORVU6Hr1G077290.1	Barley	plastid	20.97	28.57

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EMBL:AK355846	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom
UniProt:F2CW43	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G056230
EnsemblPlants:HORVU2Hr1G056230.1	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF396	SUPFAM:SSF50891	UniParc:UPI0002004B57	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CW43]

Coordinates

chrchr2H:+:353739857..353761992

Molecular Weight (calculated)

68162.0 Da

IEP (calculated)

11.133

GRAVY (calculated)

-1.264

Length

620 amino acids

Sequence
(BLAST)

001: MPKFKKNPNP RVFLDISIDG RLTERITFEL FADVVPKTAE NFRALCTGEK GLGESTKKPL YFKGTHIHRI IPGFMVQGGD FSRGDGRGGE SIYGGKFQDE
101: NFKLKHDQPG ILSMANSGED SNGSQFFITF KAVPHLDGKH VVFGKILNGK ALLKKLEALG SESGKPTSLV KIVDCGEASN IDTQNQLHGE KEKKLKRAVE
201: DNSDAGGRVK TKKPSSVDKR RKKRKNYSSD SYSSETSDSQ SYSSDSGSDS ESYSSASSDT SSSSDHRHKR RKGSKKVKRK PAKRKSSHKK SKSKSRGTKR
301: SKRSYGSSSD DSKSSSSSFD NESAGCRTKH RLKKEKENTK TINLEIRKSL EYADKGKQMI AGSKPLHNDE NGAEERDDTN PTRADTTLSR ADGNITAVAA
401: GTGISEAGAE RNPLSNEPVP TNGQDLAMGS TEDGRVRKGR GFTQKYSFAR RYRTPSPECS HVRSSYSGGI NYRWNNFNRH GRNGPYGARS PMRRYHGSPR
501: AGSPPRYTRS NRSRSRSHSP VRRRDSGGRH RRPSPRRSRS PAEQHKRDAA YGPRSGRGGG GGSSANRGRS RSRSKNRDAS RSRSPDAAPA KRASSKYNRR
601: RSSSSRSSSP SGSKGGLVSY

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.