Factsheet for Bra040447.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53714	Canola	nucleus	99.81	94.96
AT3G63400.4	Thale cress	nucleus	74.67	69.3
Bra011568.1-P	Field mustard	cytosol	21.17	65.5
Bra033574.1-P	Field mustard	cytosol	20.79	63.95
Bra010728.1-P	Field mustard	cytosol	20.6	63.37
Bra037296.1-P	Field mustard	cytosol	19.85	61.4
Bra007214.1-P	Field mustard	cytosol	20.6	59.89
Bra002623.1-P	Field mustard	cytosol	19.85	53.57
Bra018353.1-P	Field mustard	endoplasmic reticulum	19.85	52.24
Bra006748.1-P	Field mustard	endoplasmic reticulum	19.85	52.24
Bra005088.1-P	Field mustard	plastid	18.15	47.06
Bra007200.1-P	Field mustard	endoplasmic reticulum	19.85	46.88
Bra017105.1-P	Field mustard	plastid	18.15	46.38
KRG95597	Soybean	nucleus	56.14	45.07
KRH67275	Soybean	nucleus	55.77	44.16
Bra011574.1-P	Field mustard	endoplasmic reticulum	18.53	43.75
PGSC0003DMT400049782	Potato	nucleus	53.88	43.31
Solyc09g065720.2.1	Tomato	nucleus	53.69	43.03
VIT_00s0179g00290.t01	Wine grape	endoplasmic reticulum, golgi	58.79	42.78
Bra034667.1-P	Field mustard	endoplasmic reticulum	17.96	42.6
Bra007655.1-P	Field mustard	plastid	18.53	38.13
Bra006182.1-P	Field mustard	plastid	17.96	36.97
Bra014414.1-P	Field mustard	plastid	17.77	36.43
TraesCS2B01G260600.1	Wheat	nucleus	43.1	35.91
TraesCS2D01G244700.1	Wheat	nucleus	43.1	35.85
TraesCS2A01G237700.1	Wheat	nucleus	43.1	35.46
HORVU2Hr1G056230.1	Barley	nucleus	41.4	35.32
GSMUA_Achr5P03050_001	Banana	nucleus	46.12	35.16
Bra015237.1-P	Field mustard	cytosol	23.82	34.9
EER95944	Sorghum	nucleus	42.34	34.57
Zm00001d007826_P002	Maize	nucleus	41.4	32.69
Zm00001d018944_P004	Maize	nucleus	42.34	31.77
Bra011346.1-P	Field mustard	nucleus	37.62	25.78

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra040447	EnsemblPlants:Bra040447.1	EnsemblPlants:Bra040447.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4FH69	PFAM:PF00160
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF396	SUPFAM:SSF50891
UniParc:UPI0002545265	SEG:seg	:	:	:	:

Description

AT3G63400 (E=1e-069) | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein

Coordinates

chrA04:+:82507..85375

Molecular Weight (calculated)

58587.2 Da

IEP (calculated)

11.113

GRAVY (calculated)

-1.307

Length

529 amino acids

Sequence
(BLAST)

001: MSSSKKKNPT VFLDVSIGGD PLERIVIELF AHLVPKTAEN FRALCTGEAG LGKTTSKPLH FKGSSFHRVI KGFMAQGGDF SNGNGTGGES IYGGKFPDEN
101: FELDHEEGGV LSMANCGPNT NGSQFFILFK RQPHLDGKHV VFGKVVKGME VVKKMELVGT SDGKPTSNVK IIDCGEVSQL KGEDAAEKDK GKLKKSSKDS
201: REKRTKRKRR YSSSSDSYSS SSESDSESET DSSSYESSSS SDGKRRKRRS TKRHKGRRGE RKIKGRKGKK NARGDRPPQR RNKDSSSDTE SSNSDDERMG
301: HEKAKKSKKA KDGVPVRNAA DSSPAEKKFS GDKPDSLLNE NELVGNGKAT KVDNQRADSV KSRSMSPVSR RGQNSRSKSP ASRSPVRDVG NRSTSPLERK
401: SSKSPSPNGE PKRIRKGRGF TERYSFARKY RTPSPERSPP RRWPERRSFQ DRNTDRYNRR RRSISRSPDG QRRGLRESQS PSHRSPRKRQ PISQDLKSRL
501: GPQRSPAESL SASPSTSPSG QRGLVSYAD

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.