CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040447.1-P	Field mustard	nucleus	94.96	99.81
CDX93909	Canola	nucleus	90.11	81.86
AT3G63400.4	Thale cress	nucleus	75.9	74.04
CDX69094	Canola	cytosol	19.96	64.53
CDX72741	Canola	cytosol	19.96	64.53
CDY22414	Canola	cytosol, extracellular	19.78	63.95
CDY12100	Canola	cytosol	19.6	63.37
CDX90292	Canola	cytosol	19.6	63.37
CDY47469	Canola	cytosol	18.88	61.4
CDY26779	Canola	cytosol	18.88	61.4
CDY27248	Canola	cytosol	19.6	59.89
CDX72175	Canola	cytosol	19.42	59.02
CDY61026	Canola	endoplasmic reticulum	18.88	52.24
CDY58941	Canola	endoplasmic reticulum	18.88	52.24
CDY55458	Canola	endoplasmic reticulum	18.88	52.24
CDX71155	Canola	endoplasmic reticulum	18.88	52.24
CDY52123	Canola	endoplasmic reticulum	18.7	50.98
CDX80340	Canola	endoplasmic reticulum	18.7	50.98
KRG95597	Soybean	nucleus	56.65	47.8
CDX91486	Canola	cytosol	17.09	47.5
CDX72190	Canola	endoplasmic reticulum	19.06	47.32
CDX74892	Canola	cytosol, plastid	17.27	47.06
CDY27255	Canola	endoplasmic reticulum	18.88	46.88
KRH67275	Soybean	nucleus	56.3	46.86
CDX93307	Canola	plastid	17.09	46.34
PGSC0003DMT400049782	Potato	nucleus	54.5	46.05
CDY18371	Canola	cytosol, plastid	17.09	45.89
VIT_00s0179g00290.t01	Wine grape	endoplasmic reticulum, golgi	59.89	45.8
Solyc09g065720.2.1	Tomato	nucleus	54.14	45.61
CDX69100	Canola	endoplasmic reticulum	17.63	43.75
CDX75476	Canola	endoplasmic reticulum	17.63	43.75
CDX76307	Canola	endoplasmic reticulum	17.27	43.05
CDY17501	Canola	endoplasmic reticulum	17.09	42.22
CDY11395	Canola	plastid	17.81	38.37
TraesCS2B01G260600.1	Wheat	nucleus	43.35	37.95
CDX76611	Canola	plastid	17.27	37.94
CDY58761	Canola	plastid	17.45	37.6
TraesCS2D01G244700.1	Wheat	nucleus	42.99	37.58
HORVU2Hr1G056230.1	Barley	nucleus	41.73	37.42
GSMUA_Achr5P03050_001	Banana	nucleus	46.58	37.32
TraesCS2A01G237700.1	Wheat	nucleus	42.99	37.17
CDX93994	Canola	plastid	17.45	37.16
CDX78508	Canola	plastid	17.09	37.11
CDX70495	Canola	plastid	17.09	36.97
EER95944	Sorghum	nucleus	42.81	36.73
CDY36653	Canola	cytosol	22.84	35.18
CDX71247	Canola	cytosol	22.66	34.9
Zm00001d007826_P002	Maize	nucleus	41.73	34.63
Zm00001d018944_P004	Maize	nucleus	42.63	33.62
CDX68845	Canola	nucleus	39.57	28.76
CDX75243	Canola	nucleus	38.67	28.1

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078IWF0	UniProt:A0A078IWF0	EnsemblPlants:CDY53714	ProteinID:CDY53714
ProteinID:CDY53714.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00011273001	InterPro:IPR002130
InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071
PANTHER:PTHR11071:SF396	SUPFAM:SSF50891	UniParc:UPI0004EE0F4E	SEG:seg	:	:

Description

BnaAnng12550DBnaAnng12550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWF0]

Coordinates

chrLK033230:-:22703..26118

Molecular Weight (calculated)

62014.2 Da

IEP (calculated)

11.332

GRAVY (calculated)

-1.378

Length

556 amino acids

Sequence
(BLAST)

001: MSSSKKKNPT VFLDVSIGGD PLERIVIELF AHLVPKTAEN FRALCTGEAG LGKTTSKPLH FKGSSFHRVI KGFMAQGGDF SNGNGTGGES IYGGKFPDEN
101: FELDHEEGGV LSMANCGPNT NGSQFFILFK RQPHLDGKHV VFGKVVKGME VVKKMELVGT SDGKPTSNVK IIDCGEVSQL KGEDAAEKDK GKLKKSSKDS
201: REKRTKRKRR YSSSSDSYSS SSESDSESET DSSSYESSSS SDGKRRKRRS TKRHKGRRGE RKIKGRKGKK NARGDRPPQR RNKDSSSDTE SSNSDDERMG
301: HEKAKKSKKA KDGVPVRNAA DSSPAEKKFS GDKPDSLLNE NELVGNGKAT KVDNQRADSV KSRSMSPVSR RGQNSRSKSP ASRSPVRDVG NRSTSPRERK
401: SSKSPSPNGE PKRIRKGRGF TERYSFARKY RTPSPERSPP RRWPERRSFQ DRNTDRYPSN RSYSERSPRR RFRSPPRRRS PPRYNRRRRS ISRSPDGQRR
501: GLRESQSPSH RSPRKRQPIS QDLKSRLGPQ RSPAESLSAS PSTSPSGQRG LVSYAD

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.