CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010728.1-P	Field mustard	cytosol	100.0	100.0
CDX90292	Canola	cytosol	100.0	100.0
AT4G38740.1	Thale cress	cytosol	93.02	93.02
CDX72741	Canola	cytosol	92.44	92.44
CDY22414	Canola	cytosol, extracellular	91.86	91.86
KRH60719	Soybean	cytosol, endoplasmic reticulum, mitochondrion	87.79	87.79
KRH51416	Soybean	cytosol	87.21	87.21
KRH24153	Soybean	endoplasmic reticulum, mitochondrion, nucleus	86.05	86.05
KRH29120	Soybean	endoplasmic reticulum, nucleus	84.3	84.3
Zm00001d050635_P001	Maize	plastid	83.72	84.21
VIT_18s0001g14400.t01	Wine grape	extracellular	83.72	83.72
CDX69094	Canola	cytosol	83.14	83.14
Zm00001d016661_P001	Maize	plastid	83.14	83.14
Zm00001d016660_P001	Maize	cytosol	83.14	83.14
PGSC0003DMT400011344	Potato	cytosol	83.14	83.14
Solyc10g054910.1.1	Tomato	extracellular, unclear	83.14	83.14
TraesCS6B01G093100.2	Wheat	cytosol	82.56	83.04
TraesCS6D01G066700.1	Wheat	golgi, plastid	81.98	82.46
PGSC0003DMT400004125	Potato	extracellular	81.98	82.46
TraesCS6A01G068900.1	Wheat	cytosol	81.98	82.46
EES05164	Sorghum	cytosol	81.98	81.98
EES04388	Sorghum	cytosol	81.4	81.87
CDY47469	Canola	cytosol	81.4	81.87
Solyc01g111170.2.1	Tomato	extracellular, nucleus	81.4	81.87
CDY26779	Canola	cytosol	80.81	81.29
Os02t0121300-01	Rice	extracellular	80.81	80.81
VIT_03s0038g01930.t01	Wine grape	cytosol	80.23	80.23
TraesCS6A01G405900.1	Wheat	cytosol	70.93	73.05
CDY27248	Canola	cytosol	73.84	69.78
HORVU6Hr1G012570.2	Barley	cytosol	83.14	69.42
CDX72175	Canola	cytosol	73.26	68.85
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	73.84	67.2
CDX71155	Canola	endoplasmic reticulum	72.09	61.69
CDY61026	Canola	endoplasmic reticulum	71.51	61.19
CDY52123	Canola	endoplasmic reticulum	70.93	59.8
CDX80340	Canola	endoplasmic reticulum	70.93	59.8
CDY55458	Canola	endoplasmic reticulum	69.77	59.7
CDY58941	Canola	endoplasmic reticulum	69.77	59.7
TraesCS6B01G450300.1	Wheat	cytosol	69.19	54.34
TraesCS6B01G450400.1	Wheat	cytosol	66.28	52.05
CDX72190	Canola	endoplasmic reticulum	66.86	51.34
TraesCS6A01G405800.1	Wheat	cytosol	73.26	51.01
CDY27255	Canola	endoplasmic reticulum	66.28	50.89
CDX91486	Canola	cytosol	57.56	49.5
CDX74892	Canola	cytosol, plastid	58.14	49.02
CDX93307	Canola	plastid	57.56	48.29
CDY18371	Canola	cytosol, plastid	56.98	47.34
CDX75476	Canola	endoplasmic reticulum	58.72	45.09
CDX69100	Canola	endoplasmic reticulum	58.72	45.09
CDX78508	Canola	plastid	65.7	44.14
CDX70495	Canola	plastid	65.7	43.97
CDX76307	Canola	endoplasmic reticulum	56.4	43.5
CDX76611	Canola	plastid	63.95	43.48
CDY11395	Canola	plastid	64.53	43.02
CDY17501	Canola	endoplasmic reticulum	55.81	42.67
CDY58761	Canola	plastid	63.95	42.64
CDX93994	Canola	plastid	64.53	42.53
CDX71247	Canola	cytosol	60.47	28.81
CDY36653	Canola	cytosol	60.47	28.81
CDY53714	Canola	nucleus	63.37	19.6
CDX93909	Canola	nucleus	64.53	18.14
CDX68845	Canola	nucleus	50.0	11.24
CDX75243	Canola	nucleus	49.42	11.11

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078DMP0	UniProt:A0A078DMP0	EnsemblPlants:CDY12100	ProteinID:CDY12100
ProteinID:CDY12100.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00061071001	InterPro:IPR002130
InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF382	SUPFAM:SSF50891	UniParc:UPI0001890A67	SEG:seg	:

Description

BnaC03g60160DPeptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078DMP0]

Coordinates

chrLK032017:-:475194..475965

Molecular Weight (calculated)

18311.9 Da

IEP (calculated)

8.333

GRAVY (calculated)

-0.241

Length

172 amino acids

Sequence
(BLAST)

001: MAFPKVFFDM TVDGKPAGRI VMELYTDKTP KTAENFRALC TGEKGVGSKG KPLHFKGSSF HRVIPNFMCQ GGDFTAGNGT GGESIYGEKF ADENFERKHT
101: GPGILSMANA GPNTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSASGKPS KPVVVADCGQ LS

Best Arabidopsis Sequence Match ( AT4G38740.1 )
(BLAST)

001: MAFPKVYFDM TIDGQPAGRI VMELYTDKTP RTAENFRALC TGEKGVGGTG KPLHFKGSKF HRVIPNFMCQ GGDFTAGNGT GGESIYGSKF EDENFERKHT
101: GPGILSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPT KPVVVADCGQ LS

Arabidopsis Description

CYP18-3Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V2S8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.