Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22414 | Canola | cytosol, extracellular | 98.84 | 98.84 |
| CDY12100 | Canola | cytosol | 92.44 | 92.44 |
| CDX90292 | Canola | cytosol | 92.44 | 92.44 |
| AT2G21130.1 | Thale cress | cytosol | 90.12 | 89.08 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 86.05 | 86.05 |
| KRH51416 | Soybean | cytosol | 85.47 | 85.47 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 84.3 | 84.3 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 84.3 | 84.3 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 82.56 | 82.56 |
| PGSC0003DMT400011344 | Potato | cytosol | 82.56 | 82.56 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 81.4 | 81.4 |
| EES05164 | Sorghum | cytosol | 81.4 | 81.4 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 81.4 | 81.4 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 80.81 | 81.29 |
| PGSC0003DMT400004125 | Potato | extracellular | 80.23 | 80.7 |
| CDX69094 | Canola | cytosol | 80.23 | 80.23 |
| CDY47469 | Canola | cytosol | 79.65 | 80.12 |
| Zm00001d050635_P001 | Maize | plastid | 79.65 | 80.12 |
| CDY26779 | Canola | cytosol | 79.07 | 79.53 |
| Zm00001d016660_P001 | Maize | cytosol | 79.07 | 79.07 |
| Zm00001d016661_P001 | Maize | plastid | 79.07 | 79.07 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 78.49 | 78.95 |
| EES04388 | Sorghum | cytosol | 78.49 | 78.95 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 77.91 | 78.36 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 77.91 | 78.36 |
| Os02t0121300-01 | Rice | extracellular | 76.74 | 76.74 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 70.35 | 72.46 |
| CDY27248 | Canola | cytosol | 74.42 | 70.33 |
| CDX72175 | Canola | cytosol | 73.84 | 69.4 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 79.07 | 66.02 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 72.09 | 65.61 |
| CDX71155 | Canola | endoplasmic reticulum | 72.09 | 61.69 |
| CDY61026 | Canola | endoplasmic reticulum | 71.51 | 61.19 |
| CDY55458 | Canola | endoplasmic reticulum | 69.19 | 59.2 |
| CDY58941 | Canola | endoplasmic reticulum | 69.19 | 59.2 |
| CDY52123 | Canola | endoplasmic reticulum | 69.77 | 58.82 |
| CDX80340 | Canola | endoplasmic reticulum | 69.77 | 58.82 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 69.19 | 54.34 |
| CDX72190 | Canola | endoplasmic reticulum | 68.6 | 52.68 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 66.86 | 52.51 |
| CDY27255 | Canola | endoplasmic reticulum | 68.02 | 52.23 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 73.26 | 51.01 |
| CDX91486 | Canola | cytosol | 58.14 | 50.0 |
| CDX74892 | Canola | cytosol, plastid | 58.72 | 49.51 |
| CDX93307 | Canola | plastid | 58.14 | 48.78 |
| CDY18371 | Canola | cytosol, plastid | 57.56 | 47.83 |
| CDX69100 | Canola | endoplasmic reticulum | 58.72 | 45.09 |
| CDX75476 | Canola | endoplasmic reticulum | 58.72 | 45.09 |
| CDX76307 | Canola | endoplasmic reticulum | 57.56 | 44.39 |
| CDX78508 | Canola | plastid | 65.7 | 44.14 |
| CDX70495 | Canola | plastid | 65.7 | 43.97 |
| CDX76611 | Canola | plastid | 64.53 | 43.87 |
| CDY17501 | Canola | endoplasmic reticulum | 56.98 | 43.56 |
| CDY11395 | Canola | plastid | 65.12 | 43.41 |
| CDY58761 | Canola | plastid | 64.53 | 43.02 |
| CDX93994 | Canola | plastid | 65.12 | 42.91 |
| CDY36653 | Canola | cytosol | 62.79 | 29.92 |
| CDX71247 | Canola | cytosol | 62.21 | 29.64 |
| CDY53714 | Canola | nucleus | 64.53 | 19.96 |
| CDX93909 | Canola | nucleus | 65.7 | 18.46 |
| CDX68845 | Canola | nucleus | 50.0 | 11.24 |
| CDX75243 | Canola | nucleus | 49.42 | 11.11 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078C6N1 | EnsemblPlants:CDX72741 | ProteinID:CDX72741 | ProteinID:CDX72741.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00100340001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF382 |
| SUPFAM:SSF50891 | UniParc:UPI0001B64042 | SEG:seg | : | : | : |
Description
BnaC07g47630D
Coordinates
chrLK031796:+:2900404..2901145
Molecular Weight (calculated)
18384.9 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.295
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFPKVFFDI SINGQAAGRI VMELYTDKTP KTAENFRALC TGEKGVGRKG KPLHFKGSSF HRVIPNFMCQ GGDFTAGNGT GGESIYGDKF EDENFERKHT
101: GPGNLSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPS KPVVIADCGQ LS
101: GPGNLSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPS KPVVIADCGQ LS
001: MAFPKVYFDM TIDGQPAGRI VMELYTDKTP RTAENFRALC TGEKGVGGTG KPLHFKGSKF HRVIPNFMCQ GGDFTAGNGT GGESIYGSKF EDENFERKHT
101: GPGILSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPT KPVVVADCGQ LS
101: GPGILSMANA GANTNGSQFF ICTVKTDWLD GKHVVFGQVV EGLDVVKAIE KVGSSSGKPT KPVVVADCGQ LS
Arabidopsis Description
CYP18-3Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V2S8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.