Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27255 | Canola | endoplasmic reticulum | 99.55 | 99.55 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 93.75 | 92.11 |
| CDY55458 | Canola | endoplasmic reticulum | 66.96 | 74.63 |
| CDY58941 | Canola | endoplasmic reticulum | 66.52 | 74.13 |
| CDX71155 | Canola | endoplasmic reticulum | 65.18 | 72.64 |
| CDY61026 | Canola | endoplasmic reticulum | 65.18 | 72.64 |
| CDY52123 | Canola | endoplasmic reticulum | 65.18 | 71.57 |
| CDX80340 | Canola | endoplasmic reticulum | 65.18 | 71.57 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 62.5 | 70.35 |
| GSMUA_Achr7P17320_001 | Banana | endoplasmic reticulum | 64.73 | 69.38 |
| CDY22414 | Canola | cytosol, extracellular | 53.12 | 69.19 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 66.96 | 68.81 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 66.96 | 68.81 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 66.96 | 68.81 |
| CDX72741 | Canola | cytosol | 52.68 | 68.6 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 66.07 | 68.52 |
| Solyc06g051650.2.1 | Tomato | endoplasmic reticulum | 68.75 | 68.44 |
| TraesCS7D01G403300.2 | Wheat | mitochondrion | 66.52 | 68.35 |
| CDX69094 | Canola | cytosol | 52.23 | 68.02 |
| Os06t0708500-01 | Rice | plasma membrane, plastid | 67.41 | 67.11 |
| VIT_13s0067g00870.t01 | Wine grape | endoplasmic reticulum | 68.3 | 67.11 |
| CDX90292 | Canola | cytosol | 51.34 | 66.86 |
| CDY12100 | Canola | cytosol | 51.34 | 66.86 |
| Zm00001d014732_P002 | Maize | mitochondrion | 65.62 | 66.82 |
| PGSC0003DMT400016955 | Potato | endoplasmic reticulum | 68.3 | 66.81 |
| OQU77069 | Sorghum | mitochondrion | 65.18 | 66.36 |
| KRG97736 | Soybean | endoplasmic reticulum | 68.75 | 65.53 |
| KRH31143 | Soybean | endoplasmic reticulum | 69.2 | 65.13 |
| CDY47469 | Canola | cytosol | 49.11 | 64.33 |
| CDY26779 | Canola | cytosol | 48.66 | 63.74 |
| CDY27248 | Canola | cytosol | 50.0 | 61.54 |
| CDX72175 | Canola | cytosol | 49.55 | 60.66 |
| Zm00001d036442_P001 | Maize | mitochondrion | 63.84 | 51.62 |
| CDX69100 | Canola | endoplasmic reticulum | 51.34 | 51.34 |
| CDX75476 | Canola | endoplasmic reticulum | 51.34 | 51.34 |
| CDX76307 | Canola | endoplasmic reticulum | 50.0 | 50.22 |
| CDY17501 | Canola | endoplasmic reticulum | 50.0 | 49.78 |
| CDX91486 | Canola | cytosol | 44.2 | 49.5 |
| CDX74892 | Canola | cytosol, plastid | 44.64 | 49.02 |
| CDX93307 | Canola | plastid | 44.2 | 48.29 |
| CDY18371 | Canola | cytosol, plastid | 44.2 | 47.83 |
| CDY58761 | Canola | plastid | 50.89 | 44.19 |
| CDX76611 | Canola | plastid | 49.55 | 43.87 |
| CDY11395 | Canola | plastid | 50.0 | 43.41 |
| CDX78508 | Canola | plastid | 49.55 | 43.36 |
| CDX93994 | Canola | plastid | 50.45 | 43.3 |
| CDX70495 | Canola | plastid | 49.55 | 43.19 |
| CDX71247 | Canola | cytosol | 45.54 | 28.25 |
| CDY36653 | Canola | cytosol | 45.54 | 28.25 |
| CDY53714 | Canola | nucleus | 47.32 | 19.06 |
| CDX93909 | Canola | nucleus | 47.32 | 17.32 |
| CDX68845 | Canola | nucleus | 39.73 | 11.63 |
| CDX75243 | Canola | nucleus | 39.29 | 11.5 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078C5T5 | EnsemblPlants:CDX72190 | ProteinID:CDX72190 | ProteinID:CDX72190.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00156020001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF384 |
| SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI0004EDED0A | SEG:seg | : | : |
Description
BnaC08g26840D
Coordinates
chrLK031795:+:2928942..2930693
Molecular Weight (calculated)
24031.2 Da
IEP (calculated)
7.075
GRAVY (calculated)
0.086
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPMVNE KVADQVGEDL EGVTHKVYFD IQINGSPAGR ILIGLFGKIV PKTAENFRAL CTGEKGVGNM
101: GKPLYFKGSS FHRIIPSFMI QGGDFTRGDG RGGESIYGDK FADENFKLKH TGPGVLSMAN SGPDSNGSQF FITTVTTGWL DGHHVVFGKV LSGMEVVRKI
201: EAQGQSSGEP KGKVIILDSG EVSL
101: GKPLYFKGSS FHRIIPSFMI QGGDFTRGDG RGGESIYGDK FADENFKLKH TGPGVLSMAN SGPDSNGSQF FITTVTTGWL DGHHVVFGKV LSGMEVVRKI
201: EAQGQSSGEP KGKVIILDSG EVSL
001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPSVNE KILDAKLNQV GEDLEGVTHK VYFDIQINGS PAGRILIGLF GNIVPKTAEN FRSLCTGEKG
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL
Arabidopsis Description
CYP21-2Peptidyl-prolyl cis-trans isomerase CYP21-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.