Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 9
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31143 | Soybean | endoplasmic reticulum | 92.77 | 91.6 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 62.55 | 73.87 |
| KRG98290 | Soybean | endoplasmic reticulum | 63.83 | 73.53 |
| KRH30309 | Soybean | endoplasmic reticulum | 63.4 | 73.04 |
| GSMUA_Achr7P17320_001 | Banana | endoplasmic reticulum | 64.68 | 72.73 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 65.53 | 70.64 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 65.53 | 70.64 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 65.53 | 70.64 |
| OQU77069 | Sorghum | mitochondrion | 65.96 | 70.45 |
| Zm00001d014732_P002 | Maize | mitochondrion | 65.96 | 70.45 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 51.49 | 70.35 |
| TraesCS7D01G403300.2 | Wheat | mitochondrion | 65.11 | 70.18 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 63.83 | 69.44 |
| Bra007200.1-P | Field mustard | endoplasmic reticulum | 65.96 | 69.2 |
| CDY27255 | Canola | endoplasmic reticulum | 65.96 | 69.2 |
| KRH51416 | Soybean | cytosol | 50.64 | 69.19 |
| Os06t0708500-01 | Rice | plasma membrane, plastid | 65.96 | 68.89 |
| CDX72190 | Canola | endoplasmic reticulum | 65.53 | 68.75 |
| Solyc06g051650.2.1 | Tomato | endoplasmic reticulum | 64.26 | 67.11 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 65.11 | 67.11 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 48.94 | 66.86 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 48.94 | 66.86 |
| PGSC0003DMT400016955 | Potato | endoplasmic reticulum | 65.11 | 66.81 |
| VIT_13s0067g00870.t01 | Wine grape | endoplasmic reticulum | 63.83 | 65.79 |
| KRG97056 | Soybean | cytosol | 48.94 | 65.71 |
| KRH68802 | Soybean | cytosol | 47.66 | 64.0 |
| Zm00001d036442_P001 | Maize | mitochondrion | 65.11 | 55.23 |
| KRH13330 | Soybean | endoplasmic reticulum, nucleus | 40.43 | 52.49 |
| KRH37809 | Soybean | nucleus | 42.13 | 51.03 |
| KRH20677 | Soybean | cytosol | 39.15 | 50.27 |
| KRH60706 | Soybean | endoplasmic reticulum | 48.51 | 49.14 |
| KRH29272 | Soybean | endoplasmic reticulum | 47.66 | 47.46 |
| KRH24294 | Soybean | endoplasmic reticulum | 47.23 | 47.03 |
| KRH36359 | Soybean | nucleus, plastid | 47.66 | 44.62 |
| KRG93128 | Soybean | nucleus, plastid | 47.23 | 43.87 |
| KRH33684 | Soybean | nucleus, plastid | 48.51 | 43.35 |
| KRG96627 | Soybean | nucleus, plastid | 46.81 | 42.31 |
| KRH68358 | Soybean | plastid | 37.87 | 37.71 |
| KRH71172 | Soybean | cytosol | 42.98 | 27.98 |
| KRH04660 | Soybean | cytosol, nucleus | 42.13 | 27.5 |
| KRH50243 | Soybean | cytosol | 42.13 | 27.42 |
| KRH57738 | Soybean | cytosol, nucleus | 41.7 | 27.22 |
| KRG95597 | Soybean | nucleus | 47.23 | 16.84 |
| KRH67275 | Soybean | nucleus | 47.23 | 16.62 |
| KRH61803 | Soybean | nucleus | 38.72 | 10.79 |
| KRH15996 | Soybean | nucleus | 38.72 | 10.72 |
| KRH52477 | Soybean | nucleus | 38.3 | 10.59 |
Protein Annotations
| EntrezGene:100792649 | MapMan:18.12.1 | Gene3D:2.40.100.10 | EMBL:ACUP02010813 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | EnsemblPlantsGene:GLYMA_18G027400 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | UniProt:I1MZ24 | InterPro:IPR002130 | InterPro:IPR029000 | EnsemblPlants:KRG97736 |
| ProteinID:KRG97736 | ProteinID:KRG97736.1 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF384 | SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI000233E139 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:2060386..2063284
Molecular Weight (calculated)
25723.6 Da
IEP (calculated)
7.762
GRAVY (calculated)
-0.220
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFRGTGTLI LVSLLWLFFL CATIAFFQLH LVDNRTSNPS SRSNFIATQH DRSDTPLEQD LEGVTHKVYF DIQIHGKVAG RIVMGLFGNT VPKTAENFRA
101: LCTGEKGVGR SGKSLHYKGS TFHRIMPSFM VQGGDFTRGD GRGGESIYGD KFADENFKLK HTGPGYLSMA NSGEDTNGSQ FFITTVKTSW LDGHHVVFGK
201: VLSGMDVLYK IEAEGSENGS PKNKVVILDS GELTS
101: LCTGEKGVGR SGKSLHYKGS TFHRIMPSFM VQGGDFTRGD GRGGESIYGD KFADENFKLK HTGPGYLSMA NSGEDTNGSQ FFITTVKTSW LDGHHVVFGK
201: VLSGMDVLYK IEAEGSENGS PKNKVVILDS GELTS
001: MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPSVNE KILDAKLNQV GEDLEGVTHK VYFDIQINGS PAGRILIGLF GNIVPKTAEN FRSLCTGEKG
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL
101: VGNMGKPLYF KGSSFHRIIP GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT TSWLDGHHVV FGKVLSGMEV
201: VRKIEAQGQD SGVPKANVII FASGEVSL
Arabidopsis Description
CYP21-2Peptidyl-prolyl cis-trans isomerase CYP21-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8W5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.