CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52477	Soybean	nucleus	90.87	90.12
VIT_04s0008g05090.t01	Wine grape	nucleus	60.74	64.32
KRH15996	Soybean	nucleus	62.63	62.19
Solyc08g067090.2.1	Tomato	nucleus	57.65	60.07
PGSC0003DMT400059575	Potato	nucleus	48.04	58.02
Bra011346.1-P	Field mustard	nucleus	50.89	55.57
CDX68845	Canola	nucleus	50.06	55.16
CDX75243	Canola	nucleus	49.7	54.77
AT4G32420.6	Thale cress	nucleus	53.97	54.36
KRH29120	Soybean	endoplasmic reticulum, nucleus	10.91	53.49
KRG97056	Soybean	cytosol	11.03	53.14
KRH24153	Soybean	endoplasmic reticulum, mitochondrion, nucleus	10.79	52.91
KRH68802	Soybean	cytosol	10.91	52.57
KRH60719	Soybean	cytosol, endoplasmic reticulum, mitochondrion	10.56	51.74
KRH51416	Soybean	cytosol	10.56	51.74
HORVU6Hr1G037500.21	Barley	nucleus	48.28	49.45
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	39.74	49.34
TraesCS6A01G176900.1	Wheat	nucleus	47.92	49.09
OQU84603	Sorghum	nucleus	47.45	48.08
TraesCS6B01G208900.2	Wheat	cytosol	48.28	47.94
TraesCS6D01G167200.3	Wheat	cytosol	48.16	47.82
Zm00001d053620_P016	Maize	nucleus	46.26	47.62
Zm00001d015729_P005	Maize	nucleus	46.38	45.52
GSMUA_Achr10P...	Banana	nucleus	44.6	45.19
KRH13330	Soybean	endoplasmic reticulum, nucleus	9.61	44.75
KRH30309	Soybean	endoplasmic reticulum	10.68	44.12
KRG98290	Soybean	endoplasmic reticulum	10.68	44.12
KRG95597	Soybean	nucleus	33.45	42.79
KRH67275	Soybean	nucleus	33.81	42.66
GSMUA_Achr2P15900_001	Banana	nucleus	41.87	42.48
KRH37809	Soybean	nucleus	9.73	42.27
KRH20677	Soybean	cytosol	9.02	41.53
KRG97736	Soybean	endoplasmic reticulum	10.79	38.72
KRH31143	Soybean	endoplasmic reticulum	10.79	38.24
KRH29272	Soybean	endoplasmic reticulum	10.08	36.02
KRH60706	Soybean	endoplasmic reticulum	9.85	35.78
KRH24294	Soybean	endoplasmic reticulum	9.96	35.59
KRH57738	Soybean	cytosol, nucleus	14.59	34.17
KRH04660	Soybean	cytosol, nucleus	14.12	33.06
KRG93128	Soybean	nucleus, plastid	9.61	32.02
KRG96627	Soybean	nucleus, plastid	9.85	31.92
KRH71172	Soybean	cytosol	13.64	31.86
KRH50243	Soybean	cytosol	13.64	31.86
KRH36359	Soybean	nucleus, plastid	9.25	31.08
KRH33684	Soybean	nucleus, plastid	9.61	30.8
KRH68358	Soybean	plastid	7.83	27.97

Protein Annotations

EntrezGene:100785820	MapMan:18.12.1	Gene3D:2.40.100.10	EMBL:ACUP02002190	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	EnsemblPlantsGene:GLYMA_04G068700	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	UniProt:K7KIK5	EnsemblPlants:KRH61803	ProteinID:KRH61803	ProteinID:KRH61803.1
ProteinID:KRH61804.1	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF255
SUPFAM:SSF50891	UniParc:UPI0002339AEB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:5734490..5741121

Molecular Weight (calculated)

94969.4 Da

IEP (calculated)

12.212

GRAVY (calculated)

-1.345

Length

843 amino acids

Sequence
(BLAST)

001: MTKKKNPLVF MDVSIDGDPV ERMVFELFYD VAPKTAENFR ALCTGEKGIS PNTGKSLHYK GSFFHQIIKG SIVQGGDFVN RNGTAGESIY GSKFPDESPK
101: LKHDATGLLS MAIADRDTLG SHFIITLKAD HHLDRKHVVF GKLVQGPNVL KKIEEVGDEE GHPTVTVKII NCGEYSEDGK KVNKSKMGKN KKSSKDRRKR
201: RKYYSSKSGS SSDSDTESSE TDSDSESDMS SSSYISSSSD DRRRKRKRSK KDKYRREKRR DKRRDKKRRK KDKRSKRKSK RESGSDSDSE SNSDSSSEGE
301: GIGAQHKGLK LKDHSQKNAE TRSALVAEKD LPPAHHEKEE VGMLENEEKF SKENGEQRSN GIGGADYGSD RSEERQPDVM DDHSGKTRSR SVSPKRPISK
401: SMSISPRRSA RLSKSPSVTP KRRLSKSPSV TPKRRLSKSP SVRSPPPSQR SLSRSPARSI SRSPSRSISR SPVRGRNGRS VSRSPVRGRN GRSVSRSPVR
501: VRNGRSVSRS SVRVRNGRSV SRSPVRVRNG RSVSRSPVRG RNWRSVSRSP VRGRNGRSVS RSPARTRSLR SVSKSPVRSH SRSHRSRSSP RAPSGKIISK
601: SPVRVLRKSI SRSPVRSPAR SLSRSSGRVP SKKSISRSPV RAPSRSNRRS FSRSPSPVHR TRTPRGRSVS RSVSPDASPK RIRRGRGFSE RYSYARRYRT
701: PSRSPVRSYR YNGRNDRDRY STYRRFSPRR FRSPPPRGRT PPRYRSRRSR TPSVSRSPRY RARRYSRSRS PVRSRSLVDR SRPSRVERHA SSSRSRSPSK
801: SRSRSRSSVE SPPRASRDSR SRSSSRSPDG KQGLVSYGDG SPY

Best Arabidopsis Sequence Match ( AT4G32420.1 )
(BLAST)

001: MAKKKNPQVF MDVSIDGDPA ETMVFELFPE VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRIMKG SSAQAGDFVN RNGTAGESIY AGKFPDESPK
101: LRHEETGLLS MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK
201: RRRHSSSESE SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS
301: DVNVEIGAKK RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ
401: SKSPSSSPRW NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS
501: PVRSASRGSL GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV
601: RSSRKSVSRS PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD
701: RSPYRFSDRS DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG
801: KARSVSRSPS KARSPSKSDS TSSDNSPGGK KGLVAYD

Arabidopsis Description

CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.