Factsheet for PGSC0003DMT400059575

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g067090.2.1	Tomato	nucleus	96.28	83.07
VIT_04s0008g05090.t01	Wine grape	nucleus	62.32	54.65
KRH61803	Soybean	nucleus	58.02	48.04
KRH52477	Soybean	nucleus	57.74	47.41
Bra011346.1-P	Field mustard	nucleus	48.28	43.65
AT4G32420.6	Thale cress	nucleus	51.0	42.53
CDX75243	Canola	nucleus	46.56	42.48
CDX68845	Canola	nucleus	45.99	41.96
KRH15996	Soybean	nucleus	47.42	38.99
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	37.39	38.44
Zm00001d053620_P016	Maize	nucleus	44.56	37.97
OQU84603	Sorghum	nucleus	45.13	37.86
TraesCS6A01G176900.1	Wheat	nucleus	43.41	36.82
HORVU6Hr1G037500.21	Barley	nucleus	43.41	36.82
TraesCS6D01G167200.3	Wheat	cytosol	43.55	35.81
TraesCS6B01G208900.2	Wheat	cytosol	43.55	35.81
Zm00001d015729_P005	Maize	nucleus	43.84	35.62
GSMUA_Achr10P...	Banana	nucleus	40.26	33.77
GSMUA_Achr2P15900_001	Banana	nucleus	37.97	31.89
PGSC0003DMT400049782	Potato	nucleus	27.08	28.72
PGSC0003DMT400073838	Potato	cytosol	4.01	16.0
PGSC0003DMT400004125	Potato	extracellular	3.58	14.62
PGSC0003DMT400011344	Potato	cytosol	3.44	13.95
PGSC0003DMT400066358	Potato	cytosol	7.16	13.81
PGSC0003DMT400015869	Potato	cytosol	3.72	13.54
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	3.58	13.16
PGSC0003DMT400078234	Potato	endoplasmic reticulum	3.87	13.04
PGSC0003DMT400026079	Potato	cytosol	6.73	13.02
PGSC0003DMT400016955	Potato	endoplasmic reticulum	4.01	12.23
PGSC0003DMT400013412	Potato	extracellular, plastid	3.3	9.27

Protein Annotations

EntrezGene:102595843	MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000
UniProt:M1C4F8	PFAM:PF00160	EnsemblPlantsGene:PGSC0003DMG400023148	PGSC:PGSC0003DMG400023148	EnsemblPlants:PGSC0003DMT400059575	PFscan:PS50072
PANTHER:PTHR11071	PANTHER:PTHR11071:SF255	SUPFAM:SSF50891	UniParc:UPI000296D320	RefSeq:XP_015159352.1	SEG:seg

Description

Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Source:PGSC_GENE;Acc:PGSC0003DMG400023148]

Coordinates

chr8:+:40135619..40140646

Molecular Weight (calculated)

78698.4 Da

IEP (calculated)

12.233

GRAVY (calculated)

-1.589

Length

698 amino acids

Sequence
(BLAST)

001: MAIADRDARG SIFSITFQAD HHLDRKCVVF GKLIDGLEVL KKIESVGNEE GKPDVTVKII NCGELPDDKR KLNKLKNGKH KKSSKERRKK RRRYYTSESE
101: SSTDSDTESS ESESDSDSDV SSDSEISSSS DDRRRKKKRS KRDRHRRSKR KEKRREKKRK RRDKKSKRKS KRASDSPSES ENGRDGLEED GVRRSSEGKH
201: KSMEKKTEGN HSPSLEEGEA VSLHHKKEAT DIFEGEEVEF PKENGERQSN NTKMEIRSDK PVDRQPDVVD DHPGKSRSRS ISPKRTMSRS MSISPRRSLS
301: RSRSVSPKRS VSRSPSVRSR RSVSRSPSRS GSPHRVSQRR SSSIVKSHSG SPARSISTSP VGGKRGGSVS VSPPARAHSH RRSSRSPSAS PKRQLTPSPP
401: RTSSRKSVKS KSRTPVRSDR RSPSGSPVRP SRRSPSRSPV RSSRRSASRS SGRVPSRLRP SGRSPSRSPV KSSRRSVSRS SGRVPSRRSP SRSPGRAPSR
501: NNQRSYSRSP GSAGRRARSP VYDRARSSSR SASVDGSPKR IRRGRGFSER YSYVRRYRSR SPDRSPARPY RYGERDRYSR YRRSPRRYRS PPRGRTPPRY
601: RGRRSRSRSV SRSPVRYRAR RYSRSPVQSR SPVDRYRRSP SAERRKSPSR SRSRSESKSS RGSQSPKQVS RGKSVSSSAS PPGKAGLVSY GDGSPESG

Best Arabidopsis Sequence Match ( AT4G32420.2 )
(BLAST)

001: MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK RRRHSSSESE
101: SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS DVNVEIGAKK
201: RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ SKSPSSSPRW
301: NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS PVRSASRGSL
401: GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV RSSRKSVSRS
501: PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD RSPYRFSDRS
601: DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG KARSVSRSPS
701: KARSPSKSDS TSSDNSPGGK KGLVAYD

Arabidopsis Description

CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.