Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 9
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g076970.2.1 | Tomato | nucleus | 97.58 | 97.58 |
| VIT_06s0004g06610.t01 | Wine grape | endoplasmic reticulum | 85.99 | 89.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 78.74 | 81.91 |
| GSMUA_Achr7P17320_001 | Banana | endoplasmic reticulum | 79.71 | 78.95 |
| Os06t0708500-01 | Rice | plasma membrane, plastid | 84.54 | 77.78 |
| Zm00001d014732_P002 | Maize | mitochondrion | 82.13 | 77.27 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 81.16 | 77.06 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 81.16 | 77.06 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 81.16 | 77.06 |
| TraesCS7D01G403300.2 | Wheat | mitochondrion | 80.68 | 76.61 |
| OQU77069 | Sorghum | mitochondrion | 80.68 | 75.91 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 77.78 | 74.54 |
| PGSC0003DMT400011344 | Potato | cytosol | 56.52 | 68.02 |
| PGSC0003DMT400004125 | Potato | extracellular | 56.04 | 67.84 |
| PGSC0003DMT400016955 | Potato | endoplasmic reticulum | 74.4 | 67.25 |
| PGSC0003DMT400073838 | Potato | cytosol | 54.59 | 64.57 |
| Zm00001d036442_P001 | Maize | mitochondrion | 81.64 | 61.01 |
| PGSC0003DMT400015869 | Potato | cytosol | 51.69 | 55.73 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 45.41 | 49.47 |
| PGSC0003DMT400013412 | Potato | extracellular, plastid | 53.62 | 44.76 |
| PGSC0003DMT400066358 | Potato | cytosol | 48.79 | 27.9 |
| PGSC0003DMT400026079 | Potato | cytosol | 44.93 | 25.76 |
| PGSC0003DMT400049782 | Potato | nucleus | 51.69 | 16.26 |
| PGSC0003DMT400059575 | Potato | nucleus | 13.04 | 3.87 |
Protein Annotations
| EntrezGene:102589666 | MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | UniProt:M1CZP5 | PFAM:PF00160 | EnsemblPlantsGene:PGSC0003DMG400030445 | PGSC:PGSC0003DMG400030445 |
| EnsemblPlants:PGSC0003DMT400078234 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF384 | SUPFAM:SSF50891 | SignalP:SignalP-noTM | UniParc:UPI0002958BA8 | RefSeq:XP_006350839.1 | SEG:seg |
Description
Peptidyl-prolyl cis-trans isomerase [Source:PGSC_GENE;Acc:PGSC0003DMG400030445]
Coordinates
chr6:-:57216287..57220094
Molecular Weight (calculated)
22182.7 Da
IEP (calculated)
9.465
GRAVY (calculated)
-0.154
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATRFQPSV FLLCSLAVIG TLALAQAKSQ ENLKEVTHKV YFDVEIDGKP AGRVVMGLFG KTVPKTAENF RALCTGEKGV GKSGKPLHFK GSKFHRIIPS
101: FMIQGGDFTL GDGRGGESIY GEKFADENFK IKHTGPGQLS MANAGSDTNG SQFFITTVTT TWLDGRHVVF GKVLSGMDVV YKMEAEGRQS GTPKSTVTIA
201: DSGELPL
101: FMIQGGDFTL GDGRGGESIY GEKFADENFK IKHTGPGQLS MANAGSDTNG SQFFITTVTT TWLDGRHVVF GKVLSGMDVV YKMEAEGRQS GTPKSTVTIA
201: DSGELPL
001: MAKASFILLG TLFLFGAIAS IQAKEDLKEV THKVYFDVEI DGKSAGRVVI GLFGKAVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L
Arabidopsis Description
CYP19-4Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.