Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0708500-01 | Rice | plasma membrane, plastid | 88.18 | 86.22 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 84.55 | 85.32 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 84.55 | 85.32 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 84.55 | 85.32 |
| TraesCS7D01G403300.2 | Wheat | mitochondrion | 84.09 | 84.86 |
| VIT_06s0004g06610.t01 | Wine grape | endoplasmic reticulum | 75.0 | 82.5 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 74.09 | 81.91 |
| Solyc06g076970.2.1 | Tomato | nucleus | 76.82 | 81.64 |
| PGSC0003DMT400078234 | Potato | endoplasmic reticulum | 75.91 | 80.68 |
| GSMUA_Achr7P17320_001 | Banana | endoplasmic reticulum | 76.36 | 80.38 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 73.64 | 75.0 |
| Zm00001d036442_P001 | Maize | mitochondrion | 91.82 | 72.92 |
| EER96387 | Sorghum | cytosol | 55.91 | 70.29 |
| EES04388 | Sorghum | cytosol | 52.27 | 67.25 |
| OQU77068 | Sorghum | endoplasmic reticulum | 65.0 | 67.14 |
| EES05164 | Sorghum | cytosol | 52.27 | 66.86 |
| KRG97736 | Soybean | endoplasmic reticulum | 70.45 | 65.96 |
| Bra007200.1-P | Field mustard | endoplasmic reticulum | 66.36 | 65.18 |
| CDY27255 | Canola | endoplasmic reticulum | 66.36 | 65.18 |
| CDX72190 | Canola | endoplasmic reticulum | 66.36 | 65.18 |
| KRH31143 | Soybean | endoplasmic reticulum | 70.45 | 65.13 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 64.55 | 62.28 |
| EER88931 | Sorghum | endoplasmic reticulum | 61.82 | 61.54 |
| EER88932 | Sorghum | endoplasmic reticulum | 60.91 | 60.63 |
| EER97099 | Sorghum | endoplasmic reticulum | 54.55 | 55.56 |
| EER91725 | Sorghum | cytosol | 42.73 | 49.47 |
| EER90660 | Sorghum | plastid | 43.64 | 47.76 |
| EES17522 | Sorghum | plastid | 51.82 | 45.78 |
| EES00602 | Sorghum | plastid | 49.09 | 44.63 |
| EER88080 | Sorghum | cytosol | 46.82 | 26.48 |
| EES05845 | Sorghum | cytosol | 46.82 | 26.01 |
| EER95944 | Sorghum | nucleus | 47.73 | 16.2 |
| OQU84603 | Sorghum | nucleus | 34.55 | 9.13 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A0A1W0VUV9 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | EnsemblPlants:OQU77069 | ProteinID:OQU77069 | ProteinID:OQU77069.1 | PFAM:PF00160 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF384 |
| EnsemblPlantsGene:SORBI_3010G258000 | SUPFAM:SSF50891 | TMHMM:TMhelix | UniParc:UPI0009DC938B | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:59562891..59565130
Molecular Weight (calculated)
23579.6 Da
IEP (calculated)
10.219
GRAVY (calculated)
-0.061
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSGWRRSA GARSLWRPAT VCLWLALAAA ALTLAQVLVS LAKKDLTEVT HKVYFDIEID GKPAGRIVMG LFGKTVPKTA ENFRALCTGE KGVGKSGKAL
101: HYKGSAFHRI IPSFMLQGGD FTLGDGRGGE SIYGLKFADE NFKIKHTGPG LLSMANAGRD TNGSQFFITT VTTSWLDGKH VVFGKVLSGM DVVYKVEAEG
201: RQSGQPKSKV VITDSGELPM
101: HYKGSAFHRI IPSFMLQGGD FTLGDGRGGE SIYGLKFADE NFKIKHTGPG LLSMANAGRD TNGSQFFITT VTTSWLDGKH VVFGKVLSGM DVVYKVEAEG
201: RQSGQPKSKV VITDSGELPM
001: MASSVTLLLW SLLLLGTLSA IQAKKSKENL KEITHKVYFD VEIDGKAAGR IVMGLFGKTV PKTVENFRAL CTGEKGIGKN GKALHYKGSS FHRIIPSFML
101: QGGDFTHGNG MGGESIYGEK FADENFKLKH TGPGFLSMAN AGQDTNGSQF FITTVTTSWL DGRHVVFGKV VTGMDVVYKV EAEGNQSGTP KSKVVIVDSG
201: ELPL
101: QGGDFTHGNG MGGESIYGEK FADENFKLKH TGPGFLSMAN AGQDTNGSQF FITTVTTSWL DGRHVVFGKV VTGMDVVYKV EAEGNQSGTP KSKVVIVDSG
201: ELPL
Arabidopsis Description
CYP20-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UBF4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.