Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037189_P004 | Maize | extracellular | 95.89 | 95.89 |
| Os06t0216800-01 | Rice | cytosol | 89.46 | 87.88 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 84.83 | 87.07 |
| TraesCS7D01G176900.1 | Wheat | cytosol | 83.8 | 86.93 |
| TraesCS7B01G080700.1 | Wheat | cytosol | 84.83 | 86.84 |
| HORVU7Hr1G036160.1 | Barley | cytosol | 84.32 | 86.32 |
| GSMUA_Achr8P23380_001 | Banana | cytosol | 79.95 | 80.57 |
| GSMUA_Achr5P05580_001 | Banana | cytosol | 79.69 | 79.08 |
| Solyc01g108340.2.1 | Tomato | cytosol | 73.26 | 78.73 |
| PGSC0003DMT400066358 | Potato | cytosol | 72.75 | 78.18 |
| VIT_03s0063g01030.t01 | Wine grape | cytosol | 71.98 | 77.56 |
| KRH71172 | Soybean | cytosol | 71.47 | 77.01 |
| EES05845 | Sorghum | cytosol | 78.15 | 76.77 |
| KRH50243 | Soybean | cytosol | 71.21 | 76.73 |
| KRH57738 | Soybean | cytosol, nucleus | 70.18 | 75.83 |
| KRH04660 | Soybean | cytosol, nucleus | 69.67 | 75.28 |
| AT2G15790.1 | Thale cress | cytosol | 66.84 | 72.02 |
| Bra015237.1-P | Field mustard | cytosol | 66.07 | 71.19 |
| CDY36653 | Canola | cytosol | 66.07 | 71.19 |
| CDX71247 | Canola | cytosol | 65.81 | 70.91 |
| PGSC0003DMT400026079 | Potato | cytosol | 63.24 | 68.14 |
| EES04388 | Sorghum | cytosol | 29.56 | 67.25 |
| EES05164 | Sorghum | cytosol | 29.56 | 66.86 |
| Solyc02g090480.2.1 | Tomato | cytosol | 61.95 | 66.76 |
| EER96387 | Sorghum | cytosol | 27.76 | 61.71 |
| EER91725 | Sorghum | cytosol | 26.48 | 54.21 |
| EER90660 | Sorghum | plastid | 26.22 | 50.75 |
| EER97099 | Sorghum | endoplasmic reticulum | 26.48 | 47.69 |
| OQU77069 | Sorghum | mitochondrion | 26.48 | 46.82 |
| OQU77068 | Sorghum | endoplasmic reticulum | 25.19 | 46.01 |
| EER88932 | Sorghum | endoplasmic reticulum | 24.42 | 42.99 |
| EER88931 | Sorghum | endoplasmic reticulum | 24.42 | 42.99 |
| EES00602 | Sorghum | plastid | 25.96 | 41.74 |
| EES17522 | Sorghum | plastid | 25.19 | 39.36 |
| EER95944 | Sorghum | nucleus | 32.9 | 19.75 |
| OQU84603 | Sorghum | nucleus | 29.05 | 13.58 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:8070780 | UniProt:C5Z6V0 | InterPro:Cyclophilin-like_dom_sf |
| InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | EnsemblPlants:EER88080 | ProteinID:EER88080 | ProteinID:EER88080.1 |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:IPR029000 |
| PFAM:PF00160 | PFAM:PF00515 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50005 | PFscan:PS50072 |
| PFscan:PS50293 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF310 | SMART:SM00028 | EnsemblPlantsGene:SORBI_3010G085600 | SUPFAM:SSF48452 |
| SUPFAM:SSF50891 | unigene:Sbi.2580 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI0001A89360 | RefSeq:XP_002436713.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:7347741..7354439
Molecular Weight (calculated)
42647.2 Da
IEP (calculated)
5.737
GRAVY (calculated)
-0.566
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGAEQAP EAAAEVKNPR CFMDVTIGGE MEGRIVVELY ASVAPRTAEN FRALCTGEKG IGAASGKPLH FKGSCFHRVI KGFMVQGGDI TAGDGTGGES
101: IYGSKFEDEN FVLKHERKGM LSMANSGPNT NGSQFFITTT RTPHLDGKHV VFGRVIKGMG VVRSIEHVTV GESDCPTLDV KIVDCGELPE GADDGVVNFF
201: KDGDTYPDWP NDLEEKPAEV SWWMDAVESA KAYGNDNFKK QDYKAALRKY RKALRYLDVC WEKEEIDEDK STALRKTKSI ILTNSSACKL RLGDSKGALL
301: DADFALRETE GNAKAFFRQG QAHIALNDID AAVESFKHAL ELEPNDAGIK RELAGAKKKI ADRRDQERKA FARMFQPSGK SDKSNEENN
101: IYGSKFEDEN FVLKHERKGM LSMANSGPNT NGSQFFITTT RTPHLDGKHV VFGRVIKGMG VVRSIEHVTV GESDCPTLDV KIVDCGELPE GADDGVVNFF
201: KDGDTYPDWP NDLEEKPAEV SWWMDAVESA KAYGNDNFKK QDYKAALRKY RKALRYLDVC WEKEEIDEDK STALRKTKSI ILTNSSACKL RLGDSKGALL
301: DADFALRETE GNAKAFFRQG QAHIALNDID AAVESFKHAL ELEPNDAGIK RELAGAKKKI ADRRDQERKA FARMFQPSGK SDKSNEENN
001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V
Arabidopsis Description
CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.