Factsheet for TraesCS7D01G176900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G175300.1	Wheat	cytosol	99.47	98.42
TraesCS7B01G080700.1	Wheat	cytosol	99.47	98.16
HORVU7Hr1G036160.1	Barley	cytosol	97.87	96.58
Os06t0216800-01	Rice	cytosol	88.53	83.84
EER88080	Sorghum	cytosol	86.93	83.8
Zm00001d037189_P004	Maize	extracellular	85.6	82.52
GSMUA_Achr8P23380_001	Banana	cytosol	80.53	78.24
PGSC0003DMT400066358	Potato	cytosol	74.67	77.35
Solyc01g108340.2.1	Tomato	cytosol	74.4	77.07
GSMUA_Achr5P05580_001	Banana	cytosol	80.0	76.53
VIT_03s0063g01030.t01	Wine grape	cytosol	72.8	75.62
KRH71172	Soybean	cytosol	71.2	73.96
KRH57738	Soybean	cytosol, nucleus	70.67	73.61
TraesCS6D01G293100.1	Wheat	cytosol	80.0	73.53
KRH50243	Soybean	cytosol	70.67	73.41
KRH04660	Soybean	cytosol, nucleus	70.4	73.33
AT2G15790.1	Thale cress	cytosol	68.0	70.64
Bra015237.1-P	Field mustard	cytosol	67.2	69.81
CDY36653	Canola	cytosol	67.2	69.81
CDX71247	Canola	cytosol	66.93	69.53
PGSC0003DMT400026079	Potato	cytosol	64.0	66.48
Solyc02g090480.2.1	Tomato	cytosol	62.93	65.37
TraesCS6D01G066700.1	Wheat	golgi, plastid	29.33	64.33
TraesCS4D01G001600.1	Wheat	mitochondrion	29.07	60.89
TraesCS7D01G403300.2	Wheat	mitochondrion	28.53	49.08
TraesCS5D01G479900.1	Wheat	nucleus	25.87	48.99
TraesCS5D01G334800.2	Wheat	endoplasmic reticulum	26.13	45.37
TraesCS1D01G000800.2	Wheat	plastid	27.73	42.45
TraesCS3D01G159000.1	Wheat	plastid	26.13	40.83
TraesCS2D01G244700.1	Wheat	nucleus	33.33	19.65
TraesCS6D01G167200.3	Wheat	cytosol	31.2	13.78

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	InterPro:IPR002130	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029000
PFAM:PF00160	PFAM:PF07719	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50005	PFscan:PS50072
PFscan:PS50293	PANTHER:PTHR11071	PANTHER:PTHR11071:SF310	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_2	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS7D01G176900	EnsemblPlants:TraesCS7D01G176900.1
TIGR:cd01926	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:129780254..129785889

Molecular Weight (calculated)

41345.0 Da

IEP (calculated)

6.523

GRAVY (calculated)

-0.479

Length

375 amino acids

Sequence
(BLAST)

001: MEGAAPAPAA AAAEVKNPRC FMDITIGGEM EGRIVIELYA SVVPRTAENF RALCTGEKGV GASGKPLHYK GSYFHRIIKG FMVQGGDFTA GDGTGGESIY
101: GSKFEDENFI LKHERKGILS MANSGPNTNG SQFFITTTRT PHLDGKHVVF ARVIKGMGVV RSCEHIPVGE ADRPTVDAVI AECGELPEGA DDGVVNFFKD
201: GDMYPDWPND LDEKPTEVSW WMEAVESAKA FGNDNFKKQD YKTALRKYRK ALRYLDVCWE KEEIDEEKSS ALRKTKSIIL TNSSACKMKL GDLKGALLDA
301: DFALRETEGN AKAFFRQGQA HIALNDIDAA VESFQHALDL EPNDGAIKRE LAAAKKKISN RRDKERKAYA RMFQP

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.