Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36653 | Canola | cytosol | 92.24 | 92.24 |
| Bra015237.1-P | Field mustard | cytosol | 92.24 | 92.24 |
| CDX71247 | Canola | cytosol | 91.97 | 91.97 |
| KRH57738 | Soybean | cytosol, nucleus | 74.79 | 75.0 |
| KRH04660 | Soybean | cytosol, nucleus | 73.96 | 74.17 |
| GSMUA_Achr8P23380_001 | Banana | cytosol | 73.13 | 68.39 |
| TraesCS7D01G176900.1 | Wheat | cytosol | 70.64 | 68.0 |
| HORVU7Hr1G036160.1 | Barley | cytosol | 70.64 | 67.11 |
| Zm00001d037189_P004 | Maize | extracellular | 72.3 | 67.1 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 70.36 | 67.02 |
| TraesCS7B01G080700.1 | Wheat | cytosol | 70.36 | 66.84 |
| EER88080 | Sorghum | cytosol | 72.02 | 66.84 |
| Os06t0216800-01 | Rice | cytosol | 72.3 | 65.91 |
| GSMUA_Achr5P05580_001 | Banana | cytosol | 71.47 | 65.82 |
| EES05845 | Sorghum | cytosol | 70.36 | 64.14 |
| Os02t0761100-01 | Rice | cytosol | 69.81 | 62.53 |
| TraesCS6A01G313700.1 | Wheat | cytosol | 68.98 | 61.33 |
| AT2G16600.1 | Thale cress | cytosol | 29.36 | 61.27 |
| AT4G34870.1 | Thale cress | cytosol | 29.09 | 61.05 |
| TraesCS6D01G293100.1 | Wheat | cytosol | 68.98 | 61.03 |
| AT2G21130.1 | Thale cress | cytosol | 29.36 | 60.92 |
| TraesCS6B01G343800.1 | Wheat | cytosol | 68.7 | 60.78 |
| AT3G56070.1 | Thale cress | cytosol | 29.36 | 60.23 |
| AT4G38740.1 | Thale cress | cytosol | 28.53 | 59.88 |
| HORVU6Hr1G077290.1 | Barley | plastid | 67.87 | 53.85 |
| AT2G29960.1 | Thale cress | endoplasmic reticulum | 28.81 | 51.74 |
| AT2G38730.1 | Thale cress | cytosol | 27.15 | 49.25 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 27.7 | 49.02 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 28.53 | 45.18 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 26.59 | 42.86 |
| AT5G13120.1 | Thale cress | plastid | 28.53 | 39.77 |
| AT3G62030.2 | Thale cress | endoplasmic reticulum | 27.7 | 31.95 |
| AT3G63400.4 | Thale cress | nucleus | 35.73 | 22.63 |
| AT4G32420.6 | Thale cress | nucleus | 26.87 | 11.59 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:816074 | ProteinID:AAD41985.2 | ProteinID:AEC06438.1 |
| ArrayExpress:AT2G15790 | EnsemblPlantsGene:AT2G15790 | RefSeq:AT2G15790 | TAIR:AT2G15790 | RefSeq:AT2G15790-TAIR-G | EnsemblPlants:AT2G15790.1 |
| TAIR:AT2G15790.1 | EMBL:AY026065 | EMBL:BT028999 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000003 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010050 | GO:GO:0010582 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:IPR029000 |
| RefSeq:NP_565381.1 | PFAM:PF00160 | PFAM:PF07719 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50005 | PFscan:PS50072 |
| PFscan:PS50293 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF310 | UniProt:Q9C566 | SMART:SM00028 | Symbol:SQN |
| SUPFAM:SSF48452 | SUPFAM:SSF50891 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_2 | InterPro:TPR_repeat |
| UniParc:UPI00000A0F1D | : | : | : | : | : |
Description
CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
Coordinates
chr2:-:6877774..6880898
Molecular Weight (calculated)
40609.1 Da
IEP (calculated)
5.687
GRAVY (calculated)
-0.544
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.