Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27248 | Canola | cytosol | 90.91 | 87.91 |
| Bra007214.1-P | Field mustard | cytosol | 90.91 | 87.91 |
| CDX72175 | Canola | cytosol | 90.34 | 86.89 |
| KRH68802 | Soybean | cytosol | 81.25 | 81.71 |
| KRG97056 | Soybean | cytosol | 81.25 | 81.71 |
| VIT_14s0081g00700.t01 | Wine grape | cytosol | 80.11 | 81.03 |
| EER96387 | Sorghum | cytosol | 78.98 | 79.43 |
| PGSC0003DMT400073838 | Potato | cytosol | 78.41 | 78.86 |
| Solyc11g006070.1.1 | Tomato | cytosol, extracellular, unclear | 67.05 | 77.12 |
| Os09t0571400-01 | Rice | mitochondrion | 78.41 | 77.09 |
| TraesCS4D01G001600.1 | Wheat | mitochondrion | 77.84 | 76.54 |
| TraesCS4A01G312600.1 | Wheat | cytosol, mitochondrion, plastid | 77.27 | 75.56 |
| AT2G16600.1 | Thale cress | cytosol | 73.86 | 75.14 |
| AT4G38740.1 | Thale cress | cytosol | 72.16 | 73.84 |
| AT4G34870.1 | Thale cress | cytosol | 72.16 | 73.84 |
| AT2G21130.1 | Thale cress | cytosol | 70.45 | 71.26 |
| HORVU4Hr1G000910.3 | Barley | cytosol | 77.27 | 68.34 |
| AT2G29960.1 | Thale cress | endoplasmic reticulum | 67.61 | 59.2 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 67.61 | 58.33 |
| AT2G38730.1 | Thale cress | cytosol | 58.52 | 51.76 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 64.2 | 49.56 |
| AT5G13120.1 | Thale cress | plastid | 60.8 | 41.31 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 51.7 | 40.62 |
| AT3G62030.2 | Thale cress | endoplasmic reticulum | 62.5 | 35.14 |
| AT2G15790.1 | Thale cress | cytosol | 60.23 | 29.36 |
| AT3G63400.4 | Thale cress | nucleus | 64.77 | 20.0 |
| AT4G32420.6 | Thale cress | nucleus | 51.14 | 10.75 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:824773 | UniProt:A0A178VE97 | ProteinID:AAA74096.1 | ProteinID:AAB96833.1 |
| ProteinID:AEE79473.1 | ProteinID:AEE79474.1 | ArrayExpress:AT3G56070 | EnsemblPlantsGene:AT3G56070 | RefSeq:AT3G56070 | TAIR:AT3G56070 |
| RefSeq:AT3G56070-TAIR-G | EnsemblPlants:AT3G56070.1 | TAIR:AT3G56070.1 | EMBL:AY072128 | EMBL:AY096697 | ProteinID:CAB87406.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016018 |
| GO:GO:0016853 | GO:GO:0019538 | GO:GO:0046686 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_001319764.1 |
| RefSeq:NP_191166.1 | ProteinID:OAP04001.1 | PFAM:PF00160 | PIRSF:PIRSF001467 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF396 | UniProt:Q38867 |
| Symbol:ROC2 | SUPFAM:SSF50891 | UniParc:UPI00000A8B7A | SEG:seg | : | : |
Description
CYP19-3Peptidyl-prolyl cis-trans isomerase CYP19-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38867]
Coordinates
chr3:-:20806566..20808168
Molecular Weight (calculated)
18921.6 Da
IEP (calculated)
7.965
GRAVY (calculated)
-0.287
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPKVFFDI LIGKMKAGRV VMELFADVTP RTANNFRALC TGENGIGKAG KALHYKGSAF HRIIPGFMCQ GGDFTRGNGT GGESIYGSKF EDENFKLKHT
101: GPGILSMANS GPNTNGSQFF ICTEKTSWLD GKHVVFGKVV DGYNVVKAME DVGSDMGNPS ERVVIEDCGE LKNPSS
101: GPGILSMANS GPNTNGSQFF ICTEKTSWLD GKHVVFGKVV DGYNVVKAME DVGSDMGNPS ERVVIEDCGE LKNPSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.