Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76611 | Canola | plastid | 75.08 | 92.89 |
| Bra007655.1-P | Field mustard | plastid | 75.72 | 92.22 |
| CDY11395 | Canola | plastid | 75.4 | 91.47 |
| CDX93994 | Canola | plastid | 72.2 | 86.59 |
| CDY58761 | Canola | plastid | 71.25 | 86.43 |
| Bra014414.1-P | Field mustard | plastid | 69.97 | 84.88 |
| AT4G38740.1 | Thale cress | cytosol | 35.14 | 63.95 |
| AT2G21130.1 | Thale cress | cytosol | 35.46 | 63.79 |
| VIT_07s0005g02410.t01 | Wine grape | plastid | 51.12 | 63.24 |
| AT3G56070.1 | Thale cress | cytosol | 35.14 | 62.5 |
| AT2G16600.1 | Thale cress | cytosol | 34.5 | 62.43 |
| EES00602 | Sorghum | plastid | 47.28 | 61.16 |
| KRG96627 | Soybean | nucleus, plastid | 49.84 | 60.0 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 38.98 | 59.8 |
| AT4G34870.1 | Thale cress | cytosol | 32.59 | 59.3 |
| TraesCS3D01G159000.1 | Wheat | plastid | 45.37 | 59.17 |
| TraesCS3B01G178000.1 | Wheat | plastid | 45.05 | 58.75 |
| AT2G29960.1 | Thale cress | endoplasmic reticulum | 37.7 | 58.71 |
| TraesCS3A01G151100.1 | Wheat | plastid | 44.73 | 58.33 |
| KRH33684 | Soybean | nucleus, plastid | 48.56 | 57.79 |
| HORVU3Hr1G030750.1 | Barley | plastid | 44.09 | 57.5 |
| KRH68358 | Soybean | plastid | 41.53 | 55.08 |
| AT5G13120.1 | Thale cress | plastid | 42.81 | 51.74 |
| Zm00001d008209_P001 | Maize | plastid | 46.01 | 51.25 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 37.06 | 50.88 |
| AT2G38730.1 | Thale cress | cytosol | 30.67 | 48.24 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 30.99 | 43.3 |
| AT2G15790.1 | Thale cress | cytosol | 31.95 | 27.7 |
| AT3G63400.4 | Thale cress | nucleus | 31.63 | 17.37 |
| AT4G32420.6 | Thale cress | nucleus | 24.6 | 9.2 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:825376 | ProteinID:AAB96831.1 | ProteinID:AEE80297.1 | ProteinID:AEE80298.1 |
| EMBL:AF325026 | ArrayExpress:AT3G62030 | EnsemblPlantsGene:AT3G62030 | RefSeq:AT3G62030 | TAIR:AT3G62030 | RefSeq:AT3G62030-TAIR-G |
| EnsemblPlants:AT3G62030.2 | TAIR:AT3G62030.2 | EMBL:AY059843 | EMBL:AY086899 | EMBL:AY093284 | Unigene:At.24742 |
| ProteinID:CAB71910.1 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | UniProt:F4IX26 |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 |
| GO:GO:0009642 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009737 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0010555 | GO:GO:0016020 | GO:GO:0016853 | GO:GO:0019344 | GO:GO:0019538 |
| GO:GO:0022626 | GO:GO:0031977 | GO:GO:0042742 | GO:GO:0048046 | InterPro:IPR002130 | InterPro:IPR029000 |
| EMBL:L14845 | RefSeq:NP_001154684.1 | RefSeq:NP_191762.1 | ProteinID:OAP05771.1 | PFAM:PF00160 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00153 | ScanProsite:PS00170 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF383 | Symbol:ROC4 | SUPFAM:SSF50891 | UniParc:UPI0001A7B2B5 |
| SEG:seg | : | : | : | : | : |
Description
ROC4Rotamase CYP 4 [Source:UniProtKB/TrEMBL;Acc:F4IX26]
Coordinates
chr3:+:22973004..22975378
Molecular Weight (calculated)
34320.4 Da
IEP (calculated)
9.506
GRAVY (calculated)
-0.157
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRLLLLPYA VGAQQKLLQT PRETKVADAW NIKCQNLLLS KANQQKVFIF NHSMASSSSM QMVHTSRSIA QIGFGVKSQL VSANRTTQSV CFGARSSGIA
101: LSSRLHYASP IKQFSGVYAT TKHQRTACVK SMAAEEEEVI EPQAKVTNKV YFDVEIGGEV AGRIVMGLFG EVVPKTVENF RALCTGEKKY GYKGSSFHRI
201: IKDFMIQGGD FTEGNGTGGI SIYGAKFEDE NFTLKHTGPG ILSMANAGPN TNGSQFFICT VKTSWLDNKH VVFGQVIEGM KLVRTLESQE TRAFDVPKKG
301: CRIYACGELP LDA
101: LSSRLHYASP IKQFSGVYAT TKHQRTACVK SMAAEEEEVI EPQAKVTNKV YFDVEIGGEV AGRIVMGLFG EVVPKTVENF RALCTGEKKY GYKGSSFHRI
201: IKDFMIQGGD FTEGNGTGGI SIYGAKFEDE NFTLKHTGPG ILSMANAGPN TNGSQFFICT VKTSWLDNKH VVFGQVIEGM KLVRTLESQE TRAFDVPKKG
301: CRIYACGELP LDA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.