Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26779 | Canola | cytosol | 90.75 | 91.81 |
| CDY47469 | Canola | cytosol | 90.17 | 91.23 |
| Bra037296.1-P | Field mustard | cytosol | 90.17 | 91.23 |
| AT4G38740.1 | Thale cress | cytosol | 81.5 | 81.98 |
| AT2G21130.1 | Thale cress | cytosol | 81.5 | 81.03 |
| AT4G34870.1 | Thale cress | cytosol | 79.77 | 80.23 |
| Zm00001d050635_P001 | Maize | plastid | 78.03 | 78.95 |
| EES04388 | Sorghum | cytosol | 78.03 | 78.95 |
| EES05164 | Sorghum | cytosol | 78.03 | 78.49 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 77.46 | 78.36 |
| Os02t0121300-01 | Rice | extracellular | 77.46 | 77.91 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 76.88 | 77.78 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 76.88 | 77.78 |
| Zm00001d016661_P001 | Maize | plastid | 76.88 | 77.33 |
| Zm00001d016660_P001 | Maize | cytosol | 76.88 | 77.33 |
| AT3G56070.1 | Thale cress | cytosol | 75.14 | 73.86 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 68.79 | 71.26 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 78.61 | 66.02 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 70.52 | 64.55 |
| AT2G29960.1 | Thale cress | endoplasmic reticulum | 66.47 | 57.21 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 67.05 | 56.86 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 67.05 | 52.97 |
| AT2G38730.1 | Thale cress | cytosol | 58.38 | 50.75 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 63.58 | 50.23 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 70.52 | 49.39 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 62.43 | 47.37 |
| AT5G13120.1 | Thale cress | plastid | 66.47 | 44.4 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 51.45 | 39.73 |
| AT3G62030.2 | Thale cress | endoplasmic reticulum | 62.43 | 34.5 |
| AT2G15790.1 | Thale cress | cytosol | 61.27 | 29.36 |
| AT3G63400.4 | Thale cress | nucleus | 64.16 | 19.47 |
| AT4G32420.6 | Thale cress | nucleus | 45.66 | 9.44 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:816161 | UniProt:A0A178VVJ7 | ProteinID:AAD24594.1 | ProteinID:AEC06517.1 |
| ProteinID:AEC06518.1 | ArrayExpress:AT2G16600 | EnsemblPlantsGene:AT2G16600 | RefSeq:AT2G16600 | TAIR:AT2G16600 | RefSeq:AT2G16600-TAIR-G |
| EnsemblPlants:AT2G16600.1 | TAIR:AT2G16600.1 | EMBL:AY048215 | EMBL:AY086330 | EMBL:AY091694 | InterPro:Cyclophilin-like_dom_sf |
| InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_001077901.1 |
| RefSeq:NP_001318231.1 | ProteinID:OAP09858.1 | PFAM:PF00160 | PIRSF:PIRSF001467 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005417 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF382 | UniProt:Q38900 | Symbol:ROC3 | SUPFAM:SSF50891 | EMBL:U40399 | UniParc:UPI00000AC8BE |
| SEG:seg | : | : | : | : | : |
Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
Coordinates
chr2:+:7200423..7201755
Molecular Weight (calculated)
18493.0 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.323
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.