Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53714 | Canola | nucleus | 74.04 | 75.9 |
| Bra040447.1-P | Field mustard | nucleus | 69.3 | 74.67 |
| AT2G21130.1 | Thale cress | cytosol | 20.7 | 67.82 |
| AT4G34870.1 | Thale cress | cytosol | 20.18 | 66.86 |
| CDX93909 | Canola | nucleus | 71.4 | 66.5 |
| AT4G38740.1 | Thale cress | cytosol | 20.0 | 66.28 |
| AT3G56070.1 | Thale cress | cytosol | 20.0 | 64.77 |
| AT2G16600.1 | Thale cress | cytosol | 19.47 | 64.16 |
| AT2G29960.1 | Thale cress | endoplasmic reticulum | 19.47 | 55.22 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 18.6 | 51.96 |
| KRG95597 | Soybean | nucleus | 57.54 | 49.77 |
| AT2G38730.1 | Thale cress | cytosol | 17.37 | 49.75 |
| KRH67275 | Soybean | nucleus | 57.19 | 48.8 |
| VIT_00s0179g00290.t01 | Wine grape | endoplasmic reticulum, golgi | 61.05 | 47.87 |
| AT3G55920.1 | Thale cress | endoplasmic reticulum | 18.6 | 46.49 |
| PGSC0003DMT400049782 | Potato | nucleus | 53.33 | 46.2 |
| Solyc09g065720.2.1 | Tomato | nucleus | 53.16 | 45.91 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 16.84 | 42.86 |
| TraesCS2B01G260600.1 | Wheat | nucleus | 44.56 | 40.0 |
| TraesCS2D01G244700.1 | Wheat | nucleus | 44.56 | 39.94 |
| HORVU2Hr1G056230.1 | Barley | nucleus | 43.16 | 39.68 |
| TraesCS2A01G237700.1 | Wheat | nucleus | 44.21 | 39.19 |
| GSMUA_Achr5P03050_001 | Banana | nucleus | 47.02 | 38.62 |
| EER95944 | Sorghum | nucleus | 43.68 | 38.43 |
| AT5G13120.1 | Thale cress | plastid | 17.37 | 38.22 |
| Zm00001d007826_P002 | Maize | nucleus | 42.98 | 36.57 |
| AT2G15790.1 | Thale cress | cytosol | 22.63 | 35.73 |
| Zm00001d018944_P004 | Maize | nucleus | 43.33 | 35.04 |
| AT3G62030.2 | Thale cress | endoplasmic reticulum | 17.37 | 31.63 |
| AT4G32420.6 | Thale cress | nucleus | 40.53 | 27.6 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | EntrezGene:825515 | ProteinID:AEE80475.1 | ProteinID:AEE80476.1 | ProteinID:AEE80477.1 |
| EMBL:AK319108 | ProteinID:ANM64659.1 | ArrayExpress:AT3G63400 | EnsemblPlantsGene:AT3G63400 | RefSeq:AT3G63400 | TAIR:AT3G63400 |
| RefSeq:AT3G63400-TAIR-G | EnsemblPlants:AT3G63400.4 | EMBL:AY568527 | Unigene:At.69648 | EMBL:BT000915 | ProteinID:CAB87793.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009987 | GO:GO:0016607 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | RefSeq:NP_001190169.1 | RefSeq:NP_001326672.1 | RefSeq:NP_191899.1 |
| RefSeq:NP_850740.1 | PFAM:PF00160 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF396 | UniProt:Q9LY75 | SUPFAM:SSF50891 | UniParc:UPI00000ABF70 | SEG:seg | : |
Description
CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
Coordinates
chr3:+:23412024..23415435
Molecular Weight (calculated)
63543.8 Da
IEP (calculated)
11.561
GRAVY (calculated)
-1.358
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.