Factsheet for TraesCS2B01G260600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G244700.1	Wheat	nucleus	95.91	95.75
TraesCS2A01G237700.1	Wheat	nucleus	95.75	94.56
HORVU2Hr1G056230.1	Barley	nucleus	89.29	91.45
EER95944	Sorghum	nucleus	68.82	67.44
Zm00001d007826_P002	Maize	nucleus	66.77	63.28
Zm00001d018944_P004	Maize	nucleus	67.87	61.13
TraesCS6B01G093100.2	Wheat	cytosol	15.91	59.06
TraesCS7B01G309500.2	Wheat	mitochondrion	16.85	49.08
TraesCS5B01G478800.1	Wheat	plastid	14.49	46.46
TraesCS6B01G450300.1	Wheat	cytosol	15.75	45.66
TraesCS5B01G329000.1	Wheat	endoplasmic reticulum	15.43	45.37
AT3G63400.4	Thale cress	nucleus	40.0	44.56
CDY53714	Canola	nucleus	37.95	43.35
Bra040447.1-P	Field mustard	nucleus	35.91	43.1
PGSC0003DMT400049782	Potato	nucleus	43.62	42.1
KRH67275	Soybean	nucleus	44.25	42.07
Solyc09g065720.2.1	Tomato	nucleus	43.46	41.82
KRG95597	Soybean	nucleus	43.15	41.58
TraesCS6B01G450400.1	Wheat	cytosol	14.33	41.55
GSMUA_Achr5P03050_001	Banana	nucleus	45.35	41.5
VIT_00s0179g00290.t01	Wine grape	endoplasmic reticulum, golgi	46.14	40.3
CDX93909	Canola	nucleus	37.32	38.73
TraesCS3B01G178000.1	Wheat	plastid	14.02	37.08
TraesCS1B01G011100.1	Wheat	plastid	13.86	35.92
TraesCS7B01G080700.1	Wheat	cytosol	19.84	33.16
TraesCS6B01G343800.1	Wheat	cytosol	20.0	31.13
TraesCS6B01G208900.2	Wheat	cytosol	38.11	28.5

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PRINTS:PR00153
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF396	SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS2B01G260600	EnsemblPlants:TraesCS2B01G260600.1
TIGR:cd01926	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:329472595..329486827

Molecular Weight (calculated)

69772.8 Da

IEP (calculated)

11.122

GRAVY (calculated)

-1.268

Length

635 amino acids

Sequence
(BLAST)

001: MPKFKKNLNP QVFLEISIDG RPAERITFEL FADVVPKTAE NFRALCTGEK GLGESTKKPL YFKGTHIHRI IPGFMAQAGD FSRGDGRGGE SIYGGKFPDE
101: NFKLKHDQPG ILSMANSGEN TNGSQFFITF KAVPHLDGKH VVFGKVLNGK ALLKKLEALG SESGKPTCPV KIVDCGEASN IDTQNQLHGE KEKKLKRAVE
201: DNNDAGGRVK TKKTSSVDKR RKKRKNYSSD SYSSETSDSQ SYSSDSGSES ESYSSASLDT SSSSDHRHKR RKGSKKVKRK PAKRKSSHKK SKSKSRGTKR
301: SKRSYGSSSD ASKSSSSSSD NESAGRRTKH PLKKDQENTK IINLEMGKSL EYADKGKQTV AGSKPLHKDE NGADDRAGTQ NSEDRSSKFR DDTNPIRADT
401: TLSKADGNIT AVAAGTGMSE AGAERNPLSN EPVPTNGQDL AMGSTEDGRV RKGRGFTQKY SFARRYRTPS PECSHVRSSY NGGRNDRWNN FNRYGRNGLY
501: GARSPVRRYQ GSPRASSPPR YTRRDRSRSR SRSPVRRRDG GGRHRRPSPR RSRSSAEQHK CDAAYRPRSG RGGDGGPSAA NRGRSRSRSK NRDASRSRSP
601: NAAPAKRVSS KYNRRRSSSS RSSSPSGSKG GLVSY

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.