Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 98.99 | 98.99 |
| TraesCS5D01G479900.1 | Wheat | nucleus | 98.48 | 98.48 |
| HORVU5Hr1G111410.1 | Barley | plastid | 98.48 | 98.48 |
| Os03t0811600-01 | Rice | nucleus, plastid | 91.92 | 89.22 |
| EER90660 | Sorghum | plastid | 90.4 | 89.05 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 82.32 | 86.24 |
| KRH13330 | Soybean | endoplasmic reticulum, nucleus | 78.28 | 85.64 |
| KRH37809 | Soybean | nucleus | 83.33 | 85.05 |
| Solyc01g096520.2.1 | Tomato | cytosol, nucleus, plastid | 79.8 | 83.16 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 79.29 | 82.63 |
| KRH20677 | Soybean | cytosol | 75.76 | 81.97 |
| AT2G38730.1 | Thale cress | cytosol | 80.81 | 80.4 |
| GSMUA_Achr2P00020_001 | Banana | plastid | 84.34 | 79.9 |
| CDX91486 | Canola | cytosol | 79.8 | 79.0 |
| CDX93307 | Canola | plastid | 81.31 | 78.54 |
| Bra005088.1-P | Field mustard | plastid | 80.81 | 78.43 |
| CDX74892 | Canola | cytosol, plastid | 80.81 | 78.43 |
| CDY18371 | Canola | cytosol, plastid | 79.8 | 76.33 |
| Bra017105.1-P | Field mustard | plastid | 79.8 | 76.33 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 50.51 | 58.48 |
| Zm00001d013010_P002 | Maize | plastid | 80.3 | 51.62 |
| TraesCS7B01G309500.2 | Wheat | mitochondrion | 50.0 | 45.41 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 45.45 | 41.1 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 43.94 | 40.28 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 44.44 | 40.18 |
| TraesCS1B01G011100.1 | Wheat | plastid | 48.99 | 39.59 |
| TraesCS3B01G178000.1 | Wheat | plastid | 46.97 | 38.75 |
| TraesCS7B01G080700.1 | Wheat | cytosol | 50.0 | 26.05 |
| TraesCS6B01G343800.1 | Wheat | cytosol | 47.98 | 23.28 |
| TraesCS2B01G260600.1 | Wheat | nucleus | 46.46 | 14.49 |
| TraesCS6B01G208900.2 | Wheat | cytosol | 45.96 | 10.72 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF58 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS5B01G478800 | EnsemblPlants:TraesCS5B01G478800.1 |
| TIGR:cd01926 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:650340105..650343489
Molecular Weight (calculated)
21343.7 Da
IEP (calculated)
8.286
GRAVY (calculated)
-0.127
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAISAGPT PPAAAAASVE WHQRPPNPKN PVVFFDVTIG SIPAGRIKME LFADIVPKTA ENFRQFCTGE YRKSAIPQGY KGCQFHRVIK DFMIQGGDFV
101: KGDGSGCISI YGTKFDDENF IAKHTGPGLL SMANSGANSN GSQFFLTCAK CEWLDNKHVV FGRVLGDGLL VLRKIENVAT GPNNRPKLAC VISECGEM
101: KGDGSGCISI YGTKFDDENF IAKHTGPGLL SMANSGANSN GSQFFLTCAK CEWLDNKHVV FGRVLGDGLL VLRKIENVAT GPNNRPKLAC VISECGEM
001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
Arabidopsis Description
CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.