Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20677 | Soybean | cytosol | 91.75 | 97.27 |
| KRH13330 | Soybean | endoplasmic reticulum, nucleus | 88.66 | 95.03 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 89.18 | 91.53 |
| Solyc01g096520.2.1 | Tomato | cytosol, nucleus, plastid | 82.47 | 84.21 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 81.96 | 83.68 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 85.05 | 83.33 |
| TraesCS5B01G478800.1 | Wheat | plastid | 85.05 | 83.33 |
| HORVU5Hr1G111410.1 | Barley | plastid | 84.54 | 82.83 |
| TraesCS5D01G479900.1 | Wheat | nucleus | 84.54 | 82.83 |
| AT2G38730.1 | Thale cress | cytosol | 84.02 | 81.91 |
| EER90660 | Sorghum | plastid | 84.02 | 81.09 |
| CDX91486 | Canola | cytosol | 83.51 | 81.0 |
| GSMUA_Achr2P00020_001 | Banana | plastid | 86.6 | 80.38 |
| Bra005088.1-P | Field mustard | plastid | 84.02 | 79.9 |
| Os03t0811600-01 | Rice | nucleus, plastid | 84.02 | 79.9 |
| CDX74892 | Canola | cytosol, plastid | 84.02 | 79.9 |
| CDX93307 | Canola | plastid | 84.02 | 79.51 |
| Bra017105.1-P | Field mustard | plastid | 83.51 | 78.26 |
| CDY18371 | Canola | cytosol, plastid | 82.99 | 77.78 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 52.58 | 59.3 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 52.06 | 58.72 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 51.55 | 58.14 |
| KRH68802 | Soybean | cytosol | 52.06 | 57.71 |
| KRH51416 | Soybean | cytosol | 51.03 | 57.56 |
| KRG97056 | Soybean | cytosol | 51.03 | 56.57 |
| KRH30309 | Soybean | endoplasmic reticulum | 51.55 | 49.02 |
| KRG98290 | Soybean | endoplasmic reticulum | 51.03 | 48.53 |
| Zm00001d013010_P002 | Maize | plastid | 72.68 | 45.78 |
| KRG97736 | Soybean | endoplasmic reticulum | 51.03 | 42.13 |
| KRH31143 | Soybean | endoplasmic reticulum | 50.52 | 41.18 |
| KRG93128 | Soybean | nucleus, plastid | 50.0 | 38.34 |
| KRH36359 | Soybean | nucleus, plastid | 48.97 | 37.85 |
| KRH60706 | Soybean | endoplasmic reticulum | 44.33 | 37.07 |
| KRG96627 | Soybean | nucleus, plastid | 48.45 | 36.15 |
| KRH33684 | Soybean | nucleus, plastid | 48.97 | 36.12 |
| KRH24294 | Soybean | endoplasmic reticulum | 42.78 | 35.17 |
| KRH29272 | Soybean | endoplasmic reticulum | 42.27 | 34.75 |
| KRH68358 | Soybean | plastid | 41.24 | 33.9 |
| KRH57738 | Soybean | cytosol, nucleus | 51.03 | 27.5 |
| KRH04660 | Soybean | cytosol, nucleus | 50.52 | 27.22 |
| KRH71172 | Soybean | cytosol | 48.97 | 26.32 |
| KRH50243 | Soybean | cytosol | 48.97 | 26.32 |
| KRG95597 | Soybean | nucleus | 48.97 | 14.42 |
| KRH67275 | Soybean | nucleus | 48.45 | 14.07 |
| KRH61803 | Soybean | nucleus | 42.27 | 9.73 |
| KRH52477 | Soybean | nucleus | 41.75 | 9.53 |
| KRH15996 | Soybean | nucleus | 40.72 | 9.31 |
Protein Annotations
| EntrezGene:100305521 | MapMan:18.12.1 | Gene3D:2.40.100.10 | EMBL:ACUP02005516 | EMBL:BT089158 | UniProt:C6SVG5 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | EnsemblPlantsGene:GLYMA_09G090900 | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| EnsemblPlants:KRH37809 | ProteinID:KRH37809 | ProteinID:KRH37809.1 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 |
| ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF58 | SUPFAM:SSF50891 | UniParc:UPI0001B1566C |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:12216658..12221846
Molecular Weight (calculated)
20966.3 Da
IEP (calculated)
8.211
GRAVY (calculated)
-0.131
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSIGSGGN TSTGVEWHVR PPNPKNPIVF FDVTIGNIPA GRIKMELFAD IAPKTAENFR QFCTGEYRKA GLPVGYKGCQ FHRVIKDFMI QAGDFVKGDG
101: SGCVSIYGLK FDDENFTAKH TGPGLLSMAN SGQNTNGCQF FITCAKCDWL DNKHVVFGRV LGDGLLVVRK IENVATGPNN RPKLACVIAE CGEM
101: SGCVSIYGLK FDDENFTAKH TGPGLLSMAN SGQNTNGCQF FITCAKCDWL DNKHVVFGRV LGDGLLVVRK IENVATGPNN RPKLACVIAE CGEM
001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
Arabidopsis Description
CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.