Factsheet for Os03t0811600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 2
cytosol 1
plastid 7

Predictors

GFP

MS/MS

Papers

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G467000.1	Wheat	golgi, unclear	89.22	91.92
TraesCS5B01G478800.1	Wheat	plastid	89.22	91.92
TraesCS5D01G479900.1	Wheat	nucleus	88.73	91.41
EER90660	Sorghum	plastid	89.71	91.04
HORVU5Hr1G111410.1	Barley	plastid	87.75	90.4
KRH13330	Soybean	endoplasmic reticulum, nucleus	75.0	84.53
VIT_13s0084g00620.t01	Wine grape	cytosol	77.94	84.13
KRH37809	Soybean	nucleus	79.9	84.02
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	76.47	82.11
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	75.98	81.58
KRH20677	Soybean	cytosol	72.55	80.87
AT2G38730.1	Thale cress	cytosol	76.96	78.89
CDX93307	Canola	plastid	78.92	78.54
GSMUA_Achr2P00020_001	Banana	plastid	80.39	78.47
CDX91486	Canola	cytosol	76.47	78.0
Bra005088.1-P	Field mustard	plastid	77.94	77.94
CDX74892	Canola	cytosol, plastid	77.45	77.45
Bra017105.1-P	Field mustard	plastid	76.96	75.85
CDY18371	Canola	cytosol, plastid	76.47	75.36
Os02t0121300-01	Rice	extracellular	49.02	58.14
Os09t0571400-01	Rice	mitochondrion	49.51	56.42
Zm00001d013010_P002	Maize	plastid	79.9	52.92
Os10t0154700-01	Rice	cytosol	44.61	50.28
Os06t0708400-01	Rice	plasma membrane	49.02	48.08
Os06t0708500-01	Rice	plasma membrane, plastid	49.02	44.44
Os09t0537600-01	Rice	endoplasmic reticulum	44.12	41.86
Os05t0103200-01	Rice	plastid	49.02	40.0
Os06t0216800-01	Rice	cytosol	49.02	25.25
Os02t0761100-01	Rice	cytosol	46.08	23.33
Os07t0179200-01	Rice	nucleus	0.0	0.0
Os02t0204300-01	Rice	nucleus	0.0	0.0

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EntrezGene:4334542	ProteinID:AAP73848.1	ProteinID:ABF99496.1	EMBL:AK071076
ProteinID:BAF13587.1	ProteinID:BAS87007.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0005886
GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	GO:GO:0031011	InterPro:IPR002130	InterPro:IPR029000
EnsemblPlantsGene:Os03g0811600	EnsemblPlants:Os03t0811600-01	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	UniProt:Q7XZG9	SUPFAM:SSF50891	UniParc:UPI00001AA3DD
RefSeq:XP_015631920.1	SEG:seg	:	:	:	:

Description

CYCLOPHILIN 22Similar to Peptidyl prolyl isomerase H. (Os03t0811600-01)

Coordinates

chr3:-:33995633..33998631

Molecular Weight (calculated)

21791.1 Da

IEP (calculated)

8.289

GRAVY (calculated)

-0.191

Length

204 amino acids

Sequence
(BLAST)

001: MASSGGAAIS AGPTPPSAAA ASSSVDWHLR PPNPKNPVVF FDVTIGSIPA GRIKMELFAD IVPKTAENFR QFCTGEHRKS GLPQGYKGCQ FHRVIKDFMI
101: QGGDYMKGDG TGCTSIYGTK FDDENFIAKH TGPGLLSMAN SGVNSNGSQF FITCAKCEWL DNKHVVFGRV LGDGMLAVRK IENVATGPNN RPKLACVISE
201: CGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.