Factsheet for Bra005088.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74892	Canola	cytosol, plastid	98.04	98.04
AT2G38730.1	Thale cress	cytosol	92.16	94.47
Bra017105.1-P	Field mustard	plastid	95.1	93.72
KRH13330	Soybean	endoplasmic reticulum, nucleus	76.47	86.19
VIT_13s0084g00620.t01	Wine grape	cytosol	78.92	85.19
KRH37809	Soybean	nucleus	79.9	84.02
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	77.94	83.68
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	77.45	83.16
KRH20677	Soybean	cytosol	73.04	81.42
EER90660	Sorghum	plastid	79.9	81.09
TraesCS5B01G478800.1	Wheat	plastid	78.43	80.81
TraesCS5A01G467000.1	Wheat	golgi, unclear	78.43	80.81
TraesCS5D01G479900.1	Wheat	nucleus	77.94	80.3
HORVU5Hr1G111410.1	Barley	plastid	77.45	79.8
Os03t0811600-01	Rice	nucleus, plastid	77.94	77.94
GSMUA_Achr2P00020_001	Banana	plastid	77.45	75.6
Bra037296.1-P	Field mustard	cytosol	49.02	58.48
Bra033574.1-P	Field mustard	cytosol	49.02	58.14
Bra010728.1-P	Field mustard	cytosol	49.02	58.14
Bra011568.1-P	Field mustard	cytosol	48.53	57.89
Bra007214.1-P	Field mustard	cytosol	49.02	54.95
Bra018353.1-P	Field mustard	endoplasmic reticulum	48.04	48.76
Bra002623.1-P	Field mustard	cytosol	46.57	48.47
Bra006748.1-P	Field mustard	endoplasmic reticulum	47.55	48.26
Zm00001d013010_P002	Maize	plastid	70.59	46.75
Bra007200.1-P	Field mustard	endoplasmic reticulum	49.02	44.64
Bra007655.1-P	Field mustard	plastid	47.55	37.74
Bra014414.1-P	Field mustard	plastid	47.55	37.6
Bra011574.1-P	Field mustard	endoplasmic reticulum	40.69	37.05
Bra034667.1-P	Field mustard	endoplasmic reticulum	39.22	35.87
Bra006182.1-P	Field mustard	plastid	44.12	35.02
Bra015237.1-P	Field mustard	cytosol	47.55	26.87
Bra040447.1-P	Field mustard	nucleus	47.06	18.15
Bra011346.1-P	Field mustard	nucleus	38.73	10.23

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra005088	EnsemblPlants:Bra005088.1	EnsemblPlants:Bra005088.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	UniProt:M4CLK1	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	SUPFAM:SSF50891	UniParc:UPI00025476A2	SEG:seg

Description

AT2G38730 (E=3e-105) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

Coordinates

chrA05:+:3368572..3370195

Molecular Weight (calculated)

21908.3 Da

IEP (calculated)

8.061

GRAVY (calculated)

-0.161

Length

204 amino acids

Sequence
(BLAST)

001: MSSGGIVAGP TAASASLPSS GGGNVEWHVR PPNPKNPVVF FDVSIGGIPA GRIKMELFAD IAPKTAENFR QFCTGELRKA GKPLGYKECQ FHRVIKDFMI
101: QSGDFLKNDG SGCMSIYGHK FDDENFTAKH TGPGLLSMAN SGPDTNGCQF FISCSKCDWL DNKHVVFGRV LGDGLLVVRK IENVAVGPNN RPKLAVVITE
201: CGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.