Factsheet for Bra034667.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76307	Canola	endoplasmic reticulum	98.21	98.21
Bra011574.1-P	Field mustard	endoplasmic reticulum	86.1	85.71
AT4G34960.1	Thale cress	endoplasmic reticulum	84.3	83.93
PGSC0003DMT400015869	Potato	cytosol	61.44	71.35
VIT_03s0038g02200.t01	Wine grape	endoplasmic reticulum	70.85	70.85
GSMUA_Achr1P07610_001	Banana	endoplasmic reticulum	68.16	70.37
KRH60706	Soybean	endoplasmic reticulum	72.2	69.4
KRH29272	Soybean	endoplasmic reticulum	72.65	68.64
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	66.37	68.52
KRH24294	Soybean	endoplasmic reticulum	71.75	67.8
TraesCS5D01G334800.2	Wheat	endoplasmic reticulum	65.47	67.59
EER97099	Sorghum	endoplasmic reticulum	65.47	67.59
Zm00001d022631_P002	Maize	plastid	65.47	67.59
TraesCS5B01G329000.1	Wheat	endoplasmic reticulum	65.47	67.59
TraesCS5A01G328900.1	Wheat	endoplasmic reticulum	65.02	67.13
Os09t0537600-01	Rice	endoplasmic reticulum	64.13	66.51
Solyc01g111360.2.1	Tomato	endoplasmic reticulum	66.37	64.91
Bra018353.1-P	Field mustard	endoplasmic reticulum	51.57	57.21
Bra033574.1-P	Field mustard	cytosol	43.95	56.98
Bra011568.1-P	Field mustard	cytosol	43.5	56.73
Bra010728.1-P	Field mustard	cytosol	43.05	55.81
Bra002623.1-P	Field mustard	cytosol	48.43	55.1
Bra037296.1-P	Field mustard	cytosol	42.15	54.97
Bra006748.1-P	Field mustard	endoplasmic reticulum	48.43	53.73
Bra007214.1-P	Field mustard	cytosol	41.7	51.1
Bra007200.1-P	Field mustard	endoplasmic reticulum	49.78	49.55
Bra006182.1-P	Field mustard	plastid	46.64	40.47
Bra005088.1-P	Field mustard	plastid	35.87	39.22
Bra017105.1-P	Field mustard	plastid	35.87	38.65
Bra014414.1-P	Field mustard	plastid	42.6	36.82
Bra007655.1-P	Field mustard	plastid	41.7	36.19
Bra015237.1-P	Field mustard	cytosol	41.26	25.48
Bra040447.1-P	Field mustard	nucleus	42.6	17.96
Bra011346.1-P	Field mustard	nucleus	35.43	10.23

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra034667	EnsemblPlants:Bra034667.1	EnsemblPlants:Bra034667.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000	UniProt:M4F0S2	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF203
SUPFAM:SSF50891	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00025461BE	:	:

Description

AT4G34960 (E=6e-111) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

Coordinates

chrA08:-:12193681..12195101

Molecular Weight (calculated)

24370.1 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.232

Length

223 amino acids

Sequence
(BLAST)

001: MSKEMSFWVQ PRCLLVLAAL TIFLVLALSH TRKEEEKQVT EDCEVTHRVF LDIDIEGQRL GRIVIGLYGN VVPKTVENFR ALCTGEKGQA SSGKPLHYKG
101: TQFHRIVSGF VVQGGDIIHG DGKGSESTYG GTFPDENFKV KHSHAGVVAM GNTGPDSNGS QFFITTIKAT WLEGEHVVFG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPQDKW DEE

Best Arabidopsis Sequence Match ( AT4G34960.1 )
(BLAST)

001: MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER

Arabidopsis Description

CYP21-1Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.