Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G334800.2 | Wheat | endoplasmic reticulum | 98.61 | 98.61 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 98.61 | 98.61 |
| HORVU5Hr1G083310.3 | Barley | endoplasmic reticulum | 95.83 | 95.83 |
| EER97099 | Sorghum | endoplasmic reticulum | 87.04 | 87.04 |
| Zm00001d022631_P002 | Maize | plastid | 85.65 | 85.65 |
| Os09t0537600-01 | Rice | endoplasmic reticulum | 84.26 | 84.65 |
| PGSC0003DMT400015869 | Potato | cytosol | 62.5 | 70.31 |
| VIT_03s0038g02200.t01 | Wine grape | endoplasmic reticulum | 69.91 | 67.71 |
| GSMUA_Achr1P07610_001 | Banana | endoplasmic reticulum | 67.59 | 67.59 |
| CDX69100 | Canola | endoplasmic reticulum | 68.98 | 66.52 |
| CDX75476 | Canola | endoplasmic reticulum | 68.98 | 66.52 |
| Bra011574.1-P | Field mustard | endoplasmic reticulum | 68.52 | 66.07 |
| Bra034667.1-P | Field mustard | endoplasmic reticulum | 67.13 | 65.02 |
| CDX76307 | Canola | endoplasmic reticulum | 67.13 | 65.02 |
| CDY17501 | Canola | endoplasmic reticulum | 67.13 | 64.44 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 66.67 | 64.29 |
| Solyc01g111360.2.1 | Tomato | endoplasmic reticulum | 66.67 | 63.16 |
| KRH60706 | Soybean | endoplasmic reticulum | 66.2 | 61.64 |
| KRH24294 | Soybean | endoplasmic reticulum | 67.13 | 61.44 |
| KRH29272 | Soybean | endoplasmic reticulum | 66.67 | 61.02 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 44.44 | 57.48 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 45.37 | 57.31 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 53.7 | 53.21 |
| TraesCS4A01G312600.1 | Wheat | cytosol, mitochondrion, plastid | 43.52 | 52.22 |
| TraesCS1A01G007500.1 | Wheat | golgi | 50.0 | 44.08 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 40.28 | 43.94 |
| TraesCS3A01G151100.1 | Wheat | plastid | 45.37 | 40.83 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 42.59 | 37.25 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 45.37 | 25.86 |
| TraesCS6A01G313700.1 | Wheat | cytosol | 46.3 | 24.63 |
| TraesCS2A01G237700.1 | Wheat | nucleus | 44.44 | 14.93 |
| TraesCS6A01G176900.1 | Wheat | nucleus | 38.89 | 10.21 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF203 | SUPFAM:SSF50891 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS5A01G328900 | EnsemblPlants:TraesCS5A01G328900.1 | : |
Description
No Description!
Coordinates
chr5A:+:537952203..537957880
Molecular Weight (calculated)
23557.2 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.237
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRKAAVGFL ACLVLYLAFS SYPRSQRAAY VQLPAVTHRV YLDVEIDGQN IGRIVIGLYG EVVPKTVENF RALCTGEKGD GPKGKPLHYK GTPFHRIIPG
101: FMIQGGDIVR GDGKARESIY GGTFPDENFS VKHTHPGVVA MANSGTDSNG SQFYITTIKT GWLDGEHVVF GRVIQGMDYV YAIEGGAGTY NGKPRKKVLI
201: TDSGEIPKEK WGEEAD
101: FMIQGGDIVR GDGKARESIY GGTFPDENFS VKHTHPGVVA MANSGTDSNG SQFYITTIKT GWLDGEHVVF GRVIQGMDYV YAIEGGAGTY NGKPRKKVLI
201: TDSGEIPKEK WGEEAD
001: MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
Arabidopsis Description
CYP21-1Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.