Factsheet for TraesCS5A01G467000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G479900.1	Wheat	nucleus	99.49	99.49
TraesCS5B01G478800.1	Wheat	plastid	98.99	98.99
HORVU5Hr1G111410.1	Barley	plastid	98.48	98.48
Os03t0811600-01	Rice	nucleus, plastid	91.92	89.22
EER90660	Sorghum	plastid	89.9	88.56
VIT_13s0084g00620.t01	Wine grape	cytosol	82.32	86.24
KRH13330	Soybean	endoplasmic reticulum, nucleus	78.28	85.64
KRH37809	Soybean	nucleus	83.33	85.05
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	79.8	83.16
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	79.29	82.63
KRH20677	Soybean	cytosol	75.76	81.97
AT2G38730.1	Thale cress	cytosol	80.3	79.9
GSMUA_Achr2P00020_001	Banana	plastid	83.84	79.43
CDX91486	Canola	cytosol	79.8	79.0
Bra005088.1-P	Field mustard	plastid	80.81	78.43
CDX93307	Canola	plastid	80.81	78.05
CDX74892	Canola	cytosol, plastid	80.3	77.94
CDY18371	Canola	cytosol, plastid	79.8	76.33
Bra017105.1-P	Field mustard	plastid	79.8	76.33
TraesCS6A01G068900.1	Wheat	cytosol	50.0	57.89
TraesCS6A01G405900.1	Wheat	cytosol	47.98	56.89
TraesCS4A01G312600.1	Wheat	cytosol, mitochondrion, plastid	50.0	55.0
Zm00001d013010_P002	Maize	plastid	80.3	51.62
TraesCS7A01G410100.2	Wheat	mitochondrion	49.49	44.95
TraesCS5A01G328900.1	Wheat	endoplasmic reticulum	43.94	40.28
TraesCS1A01G007500.1	Wheat	golgi	48.99	39.59
TraesCS6A01G405800.1	Wheat	cytosol	48.99	39.27
TraesCS3A01G151100.1	Wheat	plastid	45.96	37.92
TraesCS7A01G175300.1	Wheat	cytosol	49.49	25.86
TraesCS6A01G313700.1	Wheat	cytosol	47.47	23.15
TraesCS2A01G237700.1	Wheat	nucleus	45.96	14.15
TraesCS6A01G176900.1	Wheat	nucleus	45.96	11.06

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0005886	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS5A01G467000	EnsemblPlants:TraesCS5A01G467000.1
TIGR:cd01926	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:645128813..645131603

Molecular Weight (calculated)

21385.7 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.158

Length

198 amino acids

Sequence
(BLAST)

001: MASAISAGPT PPAAAPSSVE WHQRPPNPKN PVVFFDVTIG SIPAGRIKME LFADIVPKTA ENFRQFCTGE YRKSAIPQGY KGCQFHRVIK DFMIQGGDFV
101: KGDGSGCISI YGTKFDDENF IAKHTGPGLL SMANSGANSN GSQFFLTCAK CEWLDNKHVV FGRVLGDGLL VLRKIENVAT GPNNRPKLAC VISECGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.