Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 99.49 | 99.49 |
| TraesCS5B01G478800.1 | Wheat | plastid | 98.48 | 98.48 |
| HORVU5Hr1G111410.1 | Barley | plastid | 98.48 | 98.48 |
| Os03t0811600-01 | Rice | nucleus, plastid | 91.41 | 88.73 |
| EER90660 | Sorghum | plastid | 89.39 | 88.06 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 81.82 | 85.71 |
| KRH13330 | Soybean | endoplasmic reticulum, nucleus | 77.78 | 85.08 |
| KRH37809 | Soybean | nucleus | 82.83 | 84.54 |
| Solyc01g096520.2.1 | Tomato | cytosol, nucleus, plastid | 79.29 | 82.63 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 78.79 | 82.11 |
| KRH20677 | Soybean | cytosol | 75.25 | 81.42 |
| AT2G38730.1 | Thale cress | cytosol | 79.8 | 79.4 |
| GSMUA_Achr2P00020_001 | Banana | plastid | 83.33 | 78.95 |
| CDX91486 | Canola | cytosol | 79.29 | 78.5 |
| Bra005088.1-P | Field mustard | plastid | 80.3 | 77.94 |
| CDX93307 | Canola | plastid | 80.3 | 77.56 |
| CDX74892 | Canola | cytosol, plastid | 79.8 | 77.45 |
| CDY18371 | Canola | cytosol, plastid | 79.29 | 75.85 |
| Bra017105.1-P | Field mustard | plastid | 79.29 | 75.85 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 50.0 | 57.89 |
| TraesCS4D01G001600.1 | Wheat | mitochondrion | 50.0 | 55.31 |
| Zm00001d013010_P002 | Maize | plastid | 79.8 | 51.3 |
| TraesCS7D01G403300.2 | Wheat | mitochondrion | 49.49 | 44.95 |
| TraesCS5D01G334800.2 | Wheat | endoplasmic reticulum | 44.44 | 40.74 |
| TraesCS1D01G000800.2 | Wheat | plastid | 48.99 | 39.59 |
| TraesCS3D01G159000.1 | Wheat | plastid | 47.47 | 39.17 |
| TraesCS7D01G176900.1 | Wheat | cytosol | 48.99 | 25.87 |
| TraesCS6D01G293100.1 | Wheat | cytosol | 47.98 | 23.28 |
| TraesCS2D01G244700.1 | Wheat | nucleus | 47.47 | 14.78 |
| TraesCS6D01G167200.3 | Wheat | cytosol | 46.46 | 10.84 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 |
| InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF58 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS5D01G479900 | EnsemblPlants:TraesCS5D01G479900.1 |
| TIGR:cd01926 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:517755178..517758072
Molecular Weight (calculated)
21371.7 Da
IEP (calculated)
8.286
GRAVY (calculated)
-0.159
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAISAGPT PPAAAPSSVE WHQRPPNPKN PVVFFDVTIG SIPAGRIKME LFADVVPKTA ENFRQFCTGE YRKSAIPQGY KGCQFHRVIK DFMIQGGDFV
101: KGDGSGCISI YGTKFDDENF IAKHTGPGLL SMANSGANSN GSQFFLTCAK CEWLDNKHVV FGRVLGDGLL VLRKIENVAT GPNNRPKLAC VISECGEM
101: KGDGSGCISI YGTKFDDENF IAKHTGPGLL SMANSGANSN GSQFFLTCAK CEWLDNKHVV FGRVLGDGLL VLRKIENVAT GPNNRPKLAC VISECGEM
001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
Arabidopsis Description
CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.