Factsheet for Bra017105.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18371	Canola	cytosol, plastid	99.03	99.03
Bra005088.1-P	Field mustard	plastid	93.72	95.1
AT2G38730.1	Thale cress	cytosol	90.34	93.97
KRH13330	Soybean	endoplasmic reticulum, nucleus	74.4	85.08
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	76.81	83.68
VIT_13s0084g00620.t01	Wine grape	cytosol	76.33	83.6
KRH37809	Soybean	nucleus	78.26	83.51
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	76.33	83.16
KRH20677	Soybean	cytosol	71.5	80.87
TraesCS5A01G467000.1	Wheat	golgi, unclear	76.33	79.8
TraesCS5B01G478800.1	Wheat	plastid	76.33	79.8
TraesCS5D01G479900.1	Wheat	nucleus	75.85	79.29
HORVU5Hr1G111410.1	Barley	plastid	75.85	79.29
EER90660	Sorghum	plastid	76.81	79.1
Os03t0811600-01	Rice	nucleus, plastid	75.85	76.96
GSMUA_Achr2P00020_001	Banana	plastid	75.36	74.64
Bra011568.1-P	Field mustard	cytosol	48.31	58.48
Bra037296.1-P	Field mustard	cytosol	48.31	58.48
Bra010728.1-P	Field mustard	cytosol	47.83	57.56
Bra033574.1-P	Field mustard	cytosol	47.83	57.56
Bra007214.1-P	Field mustard	cytosol	48.31	54.95
Bra018353.1-P	Field mustard	endoplasmic reticulum	47.34	48.76
Bra002623.1-P	Field mustard	cytosol	45.89	48.47
Bra006748.1-P	Field mustard	endoplasmic reticulum	46.86	48.26
Zm00001d013010_P002	Maize	plastid	67.63	45.45
Bra007200.1-P	Field mustard	endoplasmic reticulum	48.31	44.64
Bra007655.1-P	Field mustard	plastid	46.86	37.74
Bra014414.1-P	Field mustard	plastid	46.86	37.6
Bra011574.1-P	Field mustard	endoplasmic reticulum	40.1	37.05
Bra034667.1-P	Field mustard	endoplasmic reticulum	38.65	35.87
Bra006182.1-P	Field mustard	plastid	43.48	35.02
Bra015237.1-P	Field mustard	cytosol	46.86	26.87
Bra040447.1-P	Field mustard	nucleus	46.38	18.15
Bra011346.1-P	Field mustard	nucleus	38.16	10.23

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra017105	EnsemblPlants:Bra017105.1	EnsemblPlants:Bra017105.1-P	InterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	UniProt:M4DKS4	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	SUPFAM:SSF50891	UniParc:UPI00025449CF	SEG:seg

Description

AT2G38730 (E=4e-103) | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

Coordinates

chrA04:-:16591565..16593094

Molecular Weight (calculated)

22312.8 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.178

Length

207 amino acids

Sequence
(BLAST)

001: MSSGAGGIVA APPSAPSSGG GGNVEWHVRP PNPKNPVVFF DVSIGGIPAG RIKMELFADI APKTAENFRQ FCTGELRKAG KPLGYKECQF HRVIKDFMIQ
101: SGDFLKNDGN GCMSIYGHKF DDENFTAKHT GPGLLSMANS GPDTNGCQYS YLFFISCAKC EWLDNKHVVF GRVLGDGLLV VRKIENVAVG PNNRPKLAVV
201: ITECGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.