Factsheet for Bra015237.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36653	Canola	cytosol	100.0	100.0
AT2G15790.1	Thale cress	cytosol	92.24	92.24
KRH57738	Soybean	cytosol, nucleus	74.24	74.44
KRH04660	Soybean	cytosol, nucleus	73.41	73.61
TraesCS7D01G176900.1	Wheat	cytosol	69.81	67.2
GSMUA_Achr8P23380_001	Banana	cytosol	71.47	66.84
Zm00001d037189_P004	Maize	extracellular	71.47	66.32
TraesCS7A01G175300.1	Wheat	cytosol	69.53	66.23
EER88080	Sorghum	cytosol	71.19	66.07
HORVU7Hr1G036160.1	Barley	cytosol	69.53	66.05
TraesCS7B01G080700.1	Wheat	cytosol	69.53	66.05
Os06t0216800-01	Rice	cytosol	71.19	64.9
GSMUA_Achr5P05580_001	Banana	cytosol	69.81	64.29
EES05845	Sorghum	cytosol	68.98	62.88
Bra037296.1-P	Field mustard	cytosol	29.64	62.57
Bra033574.1-P	Field mustard	cytosol	29.64	62.21
Bra011568.1-P	Field mustard	cytosol	29.09	61.4
Os02t0761100-01	Rice	cytosol	68.42	61.29
TraesCS6A01G313700.1	Wheat	cytosol	68.14	60.59
Bra010728.1-P	Field mustard	cytosol	28.81	60.47
TraesCS6D01G293100.1	Wheat	cytosol	68.14	60.29
TraesCS6B01G343800.1	Wheat	cytosol	67.87	60.05
Bra007214.1-P	Field mustard	cytosol	29.09	57.69
HORVU6Hr1G077290.1	Barley	plastid	67.04	53.19
Bra018353.1-P	Field mustard	endoplasmic reticulum	28.25	50.75
Bra002623.1-P	Field mustard	cytosol	27.42	50.51
Bra006748.1-P	Field mustard	endoplasmic reticulum	27.42	49.25
Bra005088.1-P	Field mustard	plastid	26.87	47.55
Bra017105.1-P	Field mustard	plastid	26.87	46.86
Bra007200.1-P	Field mustard	endoplasmic reticulum	28.25	45.54
Bra011574.1-P	Field mustard	endoplasmic reticulum	26.59	42.86
Bra034667.1-P	Field mustard	endoplasmic reticulum	25.48	41.26
Bra006182.1-P	Field mustard	plastid	28.53	40.08
Bra007655.1-P	Field mustard	plastid	27.7	38.91
Bra014414.1-P	Field mustard	plastid	26.87	37.6
Bra040447.1-P	Field mustard	nucleus	34.9	23.82
Bra011346.1-P	Field mustard	nucleus	27.42	12.82

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	EnsemblPlantsGene:Bra015237	EnsemblPlants:Bra015237.1	EnsemblPlants:Bra015237.1-P
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000003	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006457	GO:GO:0006464
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010050	GO:GO:0010582	GO:GO:0016853	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029000	UniProt:M4DFG4	PFAM:PF00160	PFAM:PF00515
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50005	PFscan:PS50072	PFscan:PS50293	PANTHER:PTHR11071
PANTHER:PTHR11071:SF310	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0002544474	SEG:seg	:	:

Description

AT2G15790 (E=3e-192) SQN, CYP40 | SQN (SQUINT); peptidyl-prolyl cis-trans isomerase

Coordinates

chrA10:+:3072268..3074249

Molecular Weight (calculated)

40335.9 Da

IEP (calculated)

6.326

GRAVY (calculated)

-0.524

Length

361 amino acids

Sequence
(BLAST)

001: MGKSKCFMDI SIGGELEGRI IIELYDDLVP KTAENFRSLC TGDKGIGPNT GVPLHYKGSR FHRVIKGFMI QGGDISANDG TGGESIYGLK FEDENFDLKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSTEENAC PSLDVVIHDC GVIPEGEDDG ICNFFKDGDV FPDWPVDLNE
201: SPLELSWWME TVDSVKASGN EHFKKQDYKM ALRKYRKALR YLDICWEKDG IDQETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNIDAAAES LEKALQFEPN DAGLKKEYAA VMKKIAIRDN KEKKQYRKMF G

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.