Factsheet for HORVU7Hr1G036160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G175300.1	Wheat	cytosol	97.63	97.89
TraesCS7D01G176900.1	Wheat	cytosol	96.58	97.87
TraesCS7B01G080700.1	Wheat	cytosol	97.63	97.63
Os06t0216800-01	Rice	cytosol	88.16	84.6
EER88080	Sorghum	cytosol	86.32	84.32
Zm00001d037189_P004	Maize	extracellular	84.74	82.78
GSMUA_Achr8P23380_001	Banana	cytosol	79.74	78.5
PGSC0003DMT400066358	Potato	cytosol	73.42	77.07
GSMUA_Achr5P05580_001	Banana	cytosol	79.47	77.04
Solyc01g108340.2.1	Tomato	cytosol	73.16	76.8
VIT_03s0063g01030.t01	Wine grape	cytosol	71.58	75.35
KRH71172	Soybean	cytosol	70.0	73.68
KRH57738	Soybean	cytosol, nucleus	69.47	73.33
KRH50243	Soybean	cytosol	69.47	73.13
KRH04660	Soybean	cytosol, nucleus	69.21	73.06
AT2G15790.1	Thale cress	cytosol	67.11	70.64
Bra015237.1-P	Field mustard	cytosol	66.05	69.53
CDY36653	Canola	cytosol	66.05	69.53
CDX71247	Canola	cytosol	65.79	69.25
HORVU6Hr1G077290.1	Barley	plastid	79.47	66.37
PGSC0003DMT400026079	Potato	cytosol	62.89	66.2
Solyc02g090480.2.1	Tomato	cytosol	61.84	65.1
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	27.63	55.56
HORVU4Hr1G000910.3	Barley	cytosol	28.68	54.77
HORVU6Hr1G012570.2	Barley	cytosol	29.21	53.88
HORVU7Hr1G095720.2	Barley	mitochondrion	28.68	50.0
HORVU5Hr1G111410.1	Barley	plastid	26.05	50.0
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	28.16	49.54
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	26.05	45.83
HORVU3Hr1G030750.1	Barley	plastid	25.79	40.83
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	27.63	37.37
HORVU2Hr1G056230.1	Barley	nucleus	33.68	20.65
HORVU6Hr1G037500.21	Barley	nucleus	30.79	14.22

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G036160	EnsemblPlants:HORVU7Hr1G036160.1	InterPro:IPR002130	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029000	UniProt:M0XDV7	PFAM:PF00160	PFAM:PF07719
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50005	PFscan:PS50072	PFscan:PS50293	PANTHER:PTHR11071
PANTHER:PTHR11071:SF310	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI000296B929	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:83249502..83255889

Molecular Weight (calculated)

41674.3 Da

IEP (calculated)

6.332

GRAVY (calculated)

-0.486

Length

380 amino acids

Sequence
(BLAST)

001: MEGGGEGAAP PAAAAAAADV KNPRCFMDIT IGGEMEGRIV IELYASVVPR TAENFRALCT GEKGVGNSGK PLHYKGSYFH RIIKGFMVQG GDFTAGDGTG
101: GESIYGSKFE DENFILKHER KGILSMANSG PNTNGSQFFI TTTRTPHLDG KHVVFARVIK GMGVVRSCEH IPAGEADRPT VDAVIAECGE LPEGADDGVV
201: NFFKDGDMYP DWPNDLDEKP AEVSWWMEAV ESAKAFGNDN FKKQDYKTAL RKYRKALRYL DVCWEKEEID EEKSSALRKT KSIILTNSSA CKMKLGDLKG
301: ALLDADFALR ETEGNAKAFF RQGQAHIALN DIDAAVESFQ HALDLEPTDG AIKRELAAAK KKISNRRDKE RKAYARMFQP

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.