CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36653	Canola	cytosol	97.51	97.51
AT2G15790.1	Thale cress	cytosol	91.97	91.97
KRH57738	Soybean	cytosol, nucleus	73.68	73.89
KRH04660	Soybean	cytosol, nucleus	72.85	73.06
TraesCS7D01G176900.1	Wheat	cytosol	69.53	66.93
GSMUA_Achr8P23380_001	Banana	cytosol	71.47	66.84
Zm00001d037189_P004	Maize	extracellular	71.19	66.07
TraesCS7A01G175300.1	Wheat	cytosol	69.25	65.96
EER88080	Sorghum	cytosol	70.91	65.81
HORVU7Hr1G036160.1	Barley	cytosol	69.25	65.79
TraesCS7B01G080700.1	Wheat	cytosol	69.25	65.79
Os06t0216800-01	Rice	cytosol	71.19	64.9
GSMUA_Achr5P05580_001	Banana	cytosol	70.08	64.54
CDY47469	Canola	cytosol	29.64	62.57
CDX72741	Canola	cytosol	29.64	62.21
EES05845	Sorghum	cytosol	68.14	62.12
CDY26779	Canola	cytosol	29.36	61.99
CDY22414	Canola	cytosol, extracellular	29.36	61.63
Os02t0761100-01	Rice	cytosol	67.87	60.79
CDX90292	Canola	cytosol	28.81	60.47
CDX69094	Canola	cytosol	28.81	60.47
CDY12100	Canola	cytosol	28.81	60.47
TraesCS6A01G313700.1	Wheat	cytosol	67.31	59.85
TraesCS6D01G293100.1	Wheat	cytosol	67.31	59.56
TraesCS6B01G343800.1	Wheat	cytosol	67.04	59.31
CDY27248	Canola	cytosol	29.64	58.79
CDX72175	Canola	cytosol	28.81	56.83
HORVU6Hr1G077290.1	Barley	plastid	66.2	52.53
CDY55458	Canola	endoplasmic reticulum	28.25	50.75
CDY58941	Canola	endoplasmic reticulum	28.25	50.75
CDX71155	Canola	endoplasmic reticulum	27.42	49.25
CDY61026	Canola	endoplasmic reticulum	27.42	49.25
CDX80340	Canola	endoplasmic reticulum	27.42	48.53
CDY52123	Canola	endoplasmic reticulum	27.42	48.53
CDX91486	Canola	cytosol	26.59	48.0
CDX74892	Canola	cytosol, plastid	26.87	47.55
CDX93307	Canola	plastid	26.59	46.83
CDY18371	Canola	cytosol, plastid	26.59	46.38
CDX72190	Canola	endoplasmic reticulum	28.25	45.54
CDY27255	Canola	endoplasmic reticulum	28.25	45.54
CDX69100	Canola	endoplasmic reticulum	27.15	43.75
CDX75476	Canola	endoplasmic reticulum	27.15	43.75
CDX76307	Canola	endoplasmic reticulum	26.32	42.6
CDY17501	Canola	endoplasmic reticulum	26.04	41.78
CDX78508	Canola	plastid	28.53	40.23
CDX70495	Canola	plastid	28.53	40.08
CDY11395	Canola	plastid	27.98	39.15
CDX76611	Canola	plastid	26.87	38.34
CDY58761	Canola	plastid	27.15	37.98
CDX93994	Canola	plastid	27.42	37.93
CDY53714	Canola	nucleus	34.9	22.66
CDX93909	Canola	nucleus	34.9	20.59
CDX68845	Canola	nucleus	27.42	12.94
CDX75243	Canola	nucleus	27.15	12.81

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078C329	EnsemblPlants:CDX71247	ProteinID:CDX71247
ProteinID:CDX71247.1	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00144840001
InterPro:IPR002130	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR029000	PFAM:PF00160
PFAM:PF00515	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50005	PFscan:PS50072	PFscan:PS50293
PANTHER:PTHR11071	PANTHER:PTHR11071:SF310	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF50891	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0004EE6AC6	SEG:seg	:

Description

BnaC07g05260D

Coordinates

chrLK031792:-:1668433..1670839

Molecular Weight (calculated)

40323.9 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.508

Length

361 amino acids

Sequence
(BLAST)

001: MGKSKCFMDI SIGGELEGRI IIELYDDVVP KTAENFRSLC TGEKGIGPNT GVPLHYKGNR FHRVIKGFMI QGGDISAYDG TGGESIYGLK FQDENFDLKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSTEENAC PSLDVVIHDC GVIPEGQDDG ICNFFNDGDV FPDWPVDLNA
201: SPLELSWWME TVDSVKASGN DHFKKQDYKM ALRKYRKALR YLDICWEKDG IDQETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNIDAAAES LEKALQFEPN DAGLKKEYAA VMKKIAIRDN KEKKQYRKMF G

Best Arabidopsis Sequence Match ( AT2G15790.1 )
(BLAST)

001: MGRSKCFMDI SIGGELEGRI VIELYDDVVP KTAENFRLLC TGEKGLGPNT GVPLHYKGNR FHRVIKGFMI QGGDISANDG TGGESIYGLK FDDENFELKH
101: ERKGMLSMAN SGPNTNGSQF FITTTRTSHL DGKHVVFGRV TKGMGVVRSI EHVSIEEQSC PSQDVVIHDC GEIPEGADDG ICDFFKDGDV YPDWPIDLNE
201: SPAELSWWME TVDFVKAHGN EHFKKQDYKM ALRKYRKALR YLDICWEKEG IDEETSTALR KTKSQIFTNS AACKLKFGDA KGALLDTEFA MRDEDNNVKA
301: LFRQGQAYMA LNNVDAAAES LEKALQFEPN DAGIKKEYAA VMKKIAFRDN EEKKQYRKMF V

Arabidopsis Description

CYP40Peptidyl-prolyl cis-trans isomerase CYP40 [Source:UniProtKB/Swiss-Prot;Acc:Q9C566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.