Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61026 | Canola | endoplasmic reticulum | 99.0 | 99.0 |
| Bra006748.1-P | Field mustard | endoplasmic reticulum | 98.51 | 98.51 |
| CDY52123 | Canola | endoplasmic reticulum | 93.53 | 92.16 |
| CDX80340 | Canola | endoplasmic reticulum | 93.53 | 92.16 |
| AT5G58710.1 | Thale cress | endoplasmic reticulum | 92.54 | 91.18 |
| KRG98290 | Soybean | endoplasmic reticulum | 88.06 | 86.76 |
| KRH30309 | Soybean | endoplasmic reticulum | 87.56 | 86.27 |
| CDY58941 | Canola | endoplasmic reticulum | 85.07 | 85.07 |
| CDY55458 | Canola | endoplasmic reticulum | 85.07 | 85.07 |
| CDY22414 | Canola | cytosol, extracellular | 62.19 | 72.67 |
| CDY12100 | Canola | cytosol | 61.69 | 72.09 |
| CDX90292 | Canola | cytosol | 61.69 | 72.09 |
| CDX72741 | Canola | cytosol | 61.69 | 72.09 |
| CDY47469 | Canola | cytosol | 61.19 | 71.93 |
| CDY26779 | Canola | cytosol | 60.7 | 71.34 |
| CDX69094 | Canola | cytosol | 59.7 | 69.77 |
| GSMUA_Achr7P04880_001 | Banana | cytosol | 65.17 | 67.53 |
| Os06t0708400-01 | Rice | plasma membrane | 68.16 | 65.87 |
| CDX72190 | Canola | endoplasmic reticulum | 72.64 | 65.18 |
| CDY27255 | Canola | endoplasmic reticulum | 72.14 | 64.73 |
| CDY27248 | Canola | cytosol | 58.21 | 64.29 |
| CDX72175 | Canola | cytosol | 58.21 | 63.93 |
| OQU77068 | Sorghum | endoplasmic reticulum | 66.67 | 62.91 |
| EER88931 | Sorghum | endoplasmic reticulum | 65.17 | 59.28 |
| EER88932 | Sorghum | endoplasmic reticulum | 64.18 | 58.37 |
| CDX75476 | Canola | endoplasmic reticulum | 57.21 | 51.34 |
| CDX69100 | Canola | endoplasmic reticulum | 56.72 | 50.89 |
| CDX76307 | Canola | endoplasmic reticulum | 53.73 | 48.43 |
| CDY17501 | Canola | endoplasmic reticulum | 53.73 | 48.0 |
| CDX91486 | Canola | cytosol | 47.76 | 48.0 |
| CDX74892 | Canola | cytosol, plastid | 48.26 | 47.55 |
| CDX93307 | Canola | plastid | 47.76 | 46.83 |
| CDX76611 | Canola | plastid | 58.71 | 46.64 |
| CDY18371 | Canola | cytosol, plastid | 47.76 | 46.38 |
| CDY58761 | Canola | plastid | 59.2 | 46.12 |
| CDY11395 | Canola | plastid | 58.71 | 45.74 |
| CDX93994 | Canola | plastid | 59.2 | 45.59 |
| CDX78508 | Canola | plastid | 57.71 | 45.31 |
| CDX70495 | Canola | plastid | 57.71 | 45.14 |
| Zm00001d014731_P017 | Maize | endoplasmic reticulum, vacuole | 52.24 | 35.47 |
| CDX71247 | Canola | cytosol | 49.25 | 27.42 |
| CDY36653 | Canola | cytosol | 49.25 | 27.42 |
| CDY53714 | Canola | nucleus | 52.24 | 18.88 |
| CDX93909 | Canola | nucleus | 52.24 | 17.16 |
| CDX68845 | Canola | nucleus | 43.78 | 11.5 |
| CDX75243 | Canola | nucleus | 43.28 | 11.37 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078C2S2 | EnsemblPlants:CDX71155 | ProteinID:CDX71155 | ProteinID:CDX71155.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00141122001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF384 |
| SUPFAM:SSF50891 | SignalP:SignalP-noTM | UniParc:UPI0001890A66 | SEG:seg | : | : |
Description
BnaC03g12390D
Coordinates
chrLK031791:-:3901264..3902893
Molecular Weight (calculated)
21704.3 Da
IEP (calculated)
9.873
GRAVY (calculated)
-0.165
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSVKLLLW SLLLLGTLTA IQAKKSKEKI TNKVYFDVEI NGKEAGRIVM GLFGKTVPKT AENFRALCTG EKGVGKKGKA LHYKGSSFHR IIPSFMLQGG
101: DFTDGNGMGG ESIYGEKFAD ENFKLKHTGP GYLSMANAGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVTG MDVVYKIEAE GSQSGTPKSK VVIVDSGELP
201: L
101: DFTDGNGMGG ESIYGEKFAD ENFKLKHTGP GYLSMANAGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVTG MDVVYKIEAE GSQSGTPKSK VVIVDSGELP
201: L
001: MAKASFILLG TLFLFGAIAS IQAKEDLKEV THKVYFDVEI DGKSAGRVVI GLFGKAVPKT AENFRALCTG EKGVGKSGKP LHYKGSKFHR IIPSFMIQGG
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L
101: DFTHGNGMGG ESIYGQKFAD ENFKLKHTGP GVLSMANSGE DTNGSQFFIT TVTTSWLDGR HVVFGKVVQG MDVVYKIEAE GKQSGTPKSK VVIADSGELP
201: L
Arabidopsis Description
CYP19-4Peptidyl-prolyl cis-trans isomerase CYP19-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDP4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.