Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13120.1 | CDX89437 | AT4G25200.1 | 21798944 |
| AT5G13120.1 | CDY03368 | AT4G25200.1 | 21798944 |
| AT5G13120.1 | CDX74635 | AT5G35750.1 | 18642946 |
| AT5G13120.1 | CDY47297 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78508 | Canola | plastid | 96.5 | 96.88 |
| Bra006182.1-P | Field mustard | plastid | 96.5 | 96.5 |
| AT5G13120.1 | Thale cress | plastid | 87.16 | 86.49 |
| CDY47469 | Canola | cytosol | 46.69 | 70.18 |
| CDY26779 | Canola | cytosol | 46.3 | 69.59 |
| Zm00001d011104_P001 | Maize | plastid | 63.42 | 65.73 |
| CDY12100 | Canola | cytosol | 43.97 | 65.7 |
| CDX90292 | Canola | cytosol | 43.97 | 65.7 |
| CDX72741 | Canola | cytosol | 43.97 | 65.7 |
| VIT_01s0146g00110.t01 | Wine grape | plastid | 66.54 | 65.27 |
| CDY22414 | Canola | cytosol, extracellular | 43.58 | 65.12 |
| PGSC0003DMT400013412 | Potato | extracellular, plastid | 62.65 | 64.92 |
| TraesCS1A01G007500.1 | Wheat | golgi | 61.87 | 64.9 |
| KRH36359 | Soybean | nucleus, plastid | 63.03 | 64.54 |
| Solyc01g009990.2.1 | Tomato | plastid | 62.26 | 64.52 |
| TraesCS1B01G011100.1 | Wheat | plastid | 61.48 | 64.49 |
| GSMUA_Achr2P21150_001 | Banana | plastid | 62.26 | 64.26 |
| EES17522 | Sorghum | plastid | 62.26 | 64.26 |
| Zm00001d035761_P001 | Maize | plastid | 62.65 | 64.14 |
| TraesCS1D01G000800.2 | Wheat | plastid | 61.09 | 64.08 |
| Os05t0103200-01 | Rice | plastid | 62.26 | 64.0 |
| KRG93128 | Soybean | nucleus, plastid | 62.65 | 63.64 |
| CDX69094 | Canola | cytosol | 41.25 | 61.63 |
| CDY61026 | Canola | endoplasmic reticulum | 45.53 | 58.21 |
| CDY58941 | Canola | endoplasmic reticulum | 45.53 | 58.21 |
| CDY55458 | Canola | endoplasmic reticulum | 45.53 | 58.21 |
| CDY52123 | Canola | endoplasmic reticulum | 45.91 | 57.84 |
| CDX80340 | Canola | endoplasmic reticulum | 45.91 | 57.84 |
| CDX71155 | Canola | endoplasmic reticulum | 45.14 | 57.71 |
| HORVU1Hr1G000710.1 | Barley | mitochondrion, plastid | 61.48 | 56.23 |
| CDY27248 | Canola | cytosol | 39.69 | 56.04 |
| CDX72175 | Canola | cytosol | 39.69 | 55.74 |
| GSMUA_Achr6P16580_001 | Banana | endoplasmic reticulum, mitochondrion | 56.42 | 53.51 |
| CDY58761 | Canola | plastid | 52.53 | 52.33 |
| CDX76611 | Canola | plastid | 51.36 | 52.17 |
| CDX93994 | Canola | plastid | 52.92 | 52.11 |
| CDY11395 | Canola | plastid | 50.97 | 50.78 |
| CDY27255 | Canola | endoplasmic reticulum | 43.58 | 50.0 |
| CDX72190 | Canola | endoplasmic reticulum | 43.19 | 49.55 |
| CDX75476 | Canola | endoplasmic reticulum | 41.63 | 47.77 |
| CDX69100 | Canola | endoplasmic reticulum | 41.25 | 47.32 |
| CDX76307 | Canola | endoplasmic reticulum | 40.47 | 46.64 |
| CDY17501 | Canola | endoplasmic reticulum | 40.08 | 45.78 |
| CDX91486 | Canola | cytosol | 34.63 | 44.5 |
| CDX74892 | Canola | cytosol, plastid | 35.02 | 44.12 |
| CDX93307 | Canola | plastid | 34.63 | 43.41 |
| CDY18371 | Canola | cytosol, plastid | 34.63 | 43.0 |
| CDX71247 | Canola | cytosol | 40.08 | 28.53 |
| CDY36653 | Canola | cytosol | 40.08 | 28.53 |
| CDY53714 | Canola | nucleus | 36.97 | 17.09 |
| CDX93909 | Canola | nucleus | 37.35 | 15.69 |
| CDX68845 | Canola | nucleus | 28.4 | 9.54 |
| CDX75243 | Canola | nucleus | 28.02 | 9.41 |
Protein Annotations
| MapMan:1.1.8.1.4.5 | MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078C0N9 | EnsemblPlants:CDX70495 | ProteinID:CDX70495 |
| ProteinID:CDX70495.1 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00140323001 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF383 |
| SUPFAM:SSF50891 | UniParc:UPI0004EEB8FB | SEG:seg | : | : | : |
Description
BnaC03g05790D
Coordinates
chrLK031791:-:693578..695433
Molecular Weight (calculated)
27845.2 Da
IEP (calculated)
10.110
GRAVY (calculated)
-0.254
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAFSMTLSN PKAFSAAPRR LSPINASAPS STTFRLNTKS TVNFIKFPSL TASSLLLHTS STKRNRRSCL SVQSSAEPLA EPQSKITHKV YFDISVGNPV
101: GKLAGRIVIG LFGDDVPQTV ENFRALCTGE KGFGYKGSTF HRVIRDFMIQ GGDFDKGNGT GGKSVYGRTF KDENFNLSHV GPGVVSMANA GPNTNGSQFF
201: ICTVKTSWLD GRHVVFGQVI EGMDVVRLIE EQETDRGDRP RKKVVIADCG QLPMSEA
101: GKLAGRIVIG LFGDDVPQTV ENFRALCTGE KGFGYKGSTF HRVIRDFMIQ GGDFDKGNGT GGKSVYGRTF KDENFNLSHV GPGVVSMANA GPNTNGSQFF
201: ICTVKTSWLD GRHVVFGQVI EGMDVVRLIE EQETDRGDRP RKKVVIADCG QLPMSEA
001: MATLSMTLSN PKSLSAPPRR LSPINTSAFT STSFRLRTKS SFDSISFSSS TPFSASSLLL HTSYTKRNHR CFSVQSNAEV VTEPQSKITH KVYFDISVGN
101: PVGKLAGRIV IGLYGDDVPQ TVENFRALCT GEKGFGYKGS TFHRVIRDFM IQGGDFEKGN GTGGKSVYGR TFKDENFKLS HVGPGVLSMA NAGPNTNGSQ
201: FFICTIKTSW LDGRHVVFGQ VIEGMEVVKL IEEQETDRGD RPRKKVVIAD CGQLPMSEA
101: PVGKLAGRIV IGLYGDDVPQ TVENFRALCT GEKGFGYKGS TFHRVIRDFM IQGGDFEKGN GTGGKSVYGR TFKDENFKLS HVGPGVLSMA NAGPNTNGSQ
201: FFICTIKTSW LDGRHVVFGQ VIEGMEVVKL IEEQETDRGD RPRKKVVIAD CGQLPMSEA
Arabidopsis Description
PNSL5Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UN74]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.