Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034667.1-P | Field mustard | endoplasmic reticulum | 98.21 | 98.21 |
| CDY17501 | Canola | endoplasmic reticulum | 95.52 | 94.67 |
| CDX75476 | Canola | endoplasmic reticulum | 87.0 | 86.61 |
| CDX69100 | Canola | endoplasmic reticulum | 86.55 | 86.16 |
| AT4G34960.1 | Thale cress | endoplasmic reticulum | 84.75 | 84.38 |
| PGSC0003DMT400015869 | Potato | cytosol | 61.44 | 71.35 |
| VIT_03s0038g02200.t01 | Wine grape | endoplasmic reticulum | 70.85 | 70.85 |
| GSMUA_Achr1P07610_001 | Banana | endoplasmic reticulum | 67.71 | 69.91 |
| KRH60706 | Soybean | endoplasmic reticulum | 72.2 | 69.4 |
| KRH29272 | Soybean | endoplasmic reticulum | 73.09 | 69.07 |
| HORVU5Hr1G083310.3 | Barley | endoplasmic reticulum | 66.37 | 68.52 |
| KRH24294 | Soybean | endoplasmic reticulum | 72.2 | 68.22 |
| Zm00001d022631_P002 | Maize | plastid | 65.47 | 67.59 |
| TraesCS5D01G334800.2 | Wheat | endoplasmic reticulum | 65.47 | 67.59 |
| TraesCS5B01G329000.1 | Wheat | endoplasmic reticulum | 65.47 | 67.59 |
| EER97099 | Sorghum | endoplasmic reticulum | 65.47 | 67.59 |
| TraesCS5A01G328900.1 | Wheat | endoplasmic reticulum | 65.02 | 67.13 |
| Os09t0537600-01 | Rice | endoplasmic reticulum | 64.13 | 66.51 |
| Solyc01g111360.2.1 | Tomato | endoplasmic reticulum | 66.37 | 64.91 |
| CDY58941 | Canola | endoplasmic reticulum | 52.02 | 57.71 |
| CDY55458 | Canola | endoplasmic reticulum | 52.02 | 57.71 |
| CDX72741 | Canola | cytosol | 44.39 | 57.56 |
| CDY22414 | Canola | cytosol, extracellular | 44.39 | 57.56 |
| CDX90292 | Canola | cytosol | 43.5 | 56.4 |
| CDX69094 | Canola | cytosol | 43.5 | 56.4 |
| CDY12100 | Canola | cytosol | 43.5 | 56.4 |
| CDY47469 | Canola | cytosol | 42.6 | 55.56 |
| CDY26779 | Canola | cytosol | 42.15 | 54.97 |
| CDX80340 | Canola | endoplasmic reticulum | 50.22 | 54.9 |
| CDY52123 | Canola | endoplasmic reticulum | 50.22 | 54.9 |
| CDY61026 | Canola | endoplasmic reticulum | 48.88 | 54.23 |
| CDX71155 | Canola | endoplasmic reticulum | 48.43 | 53.73 |
| CDY27248 | Canola | cytosol | 42.15 | 51.65 |
| CDX72175 | Canola | cytosol | 41.26 | 50.27 |
| CDY27255 | Canola | endoplasmic reticulum | 50.22 | 50.0 |
| CDX72190 | Canola | endoplasmic reticulum | 50.22 | 50.0 |
| CDX78508 | Canola | plastid | 46.64 | 40.62 |
| CDX70495 | Canola | plastid | 46.64 | 40.47 |
| CDX91486 | Canola | cytosol | 35.87 | 40.0 |
| CDX74892 | Canola | cytosol, plastid | 36.32 | 39.71 |
| CDX93307 | Canola | plastid | 35.87 | 39.02 |
| CDY18371 | Canola | cytosol, plastid | 35.87 | 38.65 |
| CDY58761 | Canola | plastid | 44.39 | 38.37 |
| CDX93994 | Canola | plastid | 44.39 | 37.93 |
| CDY11395 | Canola | plastid | 42.6 | 36.82 |
| CDX76611 | Canola | plastid | 41.7 | 36.76 |
| CDX71247 | Canola | cytosol | 42.6 | 26.32 |
| CDY36653 | Canola | cytosol | 41.7 | 25.76 |
| CDY53714 | Canola | nucleus | 43.05 | 17.27 |
| CDX93909 | Canola | nucleus | 43.5 | 15.85 |
| CDX68845 | Canola | nucleus | 36.77 | 10.72 |
| CDX75243 | Canola | nucleus | 35.87 | 10.46 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078CHQ7 | EnsemblPlants:CDX76307 | ProteinID:CDX76307 | ProteinID:CDX76307.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00126675001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 |
| PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF203 |
| SUPFAM:SSF50891 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EF0FB3 | : | : |
Description
BnaA08g10930D
Coordinates
chrLK031807:+:258064..259680
Molecular Weight (calculated)
24355.1 Da
IEP (calculated)
6.955
GRAVY (calculated)
-0.235
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKEMSFWVQ PRCLLVLAAL TIFLVLALSH TRKEEEKQVT EDCQVTHRVF LDIDIEGQRL GRIVIGLYGN VVPKTVENFR ALCTGEKGKA SSGKPLHYKG
101: TQFHRIVSGF VVQGGDIIHG DGKGSESTYG GTFPDENFKA KHSHAGVVAM ANTGPDSNGS QFFITTIKAT WLEGEHVVFG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPQDKW DEE
101: TQFHRIVSGF VVQGGDIIHG DGKGSESTYG GTFPDENFKA KHSHAGVVAM ANTGPDSNGS QFFITTIKAT WLEGEHVVFG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPQDKW DEE
001: MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
101: TPFHRIISGF VIQGGDIIHG DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG KVIQGMDNVF AIEGGAGTYS
201: GKPRKKVVIA DSGEIPKDKW DEER
Arabidopsis Description
CYP21-1Peptidyl-prolyl cis-trans isomerase CYP21-1 [Source:UniProtKB/Swiss-Prot;Acc:O49605]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.