CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74892	Canola	cytosol, plastid	96.59	97.06
CDX91486	Canola	cytosol	94.15	96.5
AT2G38730.1	Thale cress	cytosol	91.71	94.47
CDY18371	Canola	cytosol, plastid	94.15	93.24
KRH13330	Soybean	endoplasmic reticulum, nucleus	75.61	85.64
VIT_13s0084g00620.t01	Wine grape	cytosol	77.56	84.13
KRH37809	Soybean	nucleus	79.51	84.02
Solyc01g096520.2.1	Tomato	cytosol, nucleus, plastid	77.07	83.16
PGSC0003DMT400013826	Potato	cytosol, mitochondrion	76.59	82.63
EER90660	Sorghum	plastid	80.49	82.09
KRH20677	Soybean	cytosol	72.68	81.42
TraesCS5B01G478800.1	Wheat	plastid	78.54	81.31
TraesCS5A01G467000.1	Wheat	golgi, unclear	78.05	80.81
TraesCS5D01G479900.1	Wheat	nucleus	77.56	80.3
HORVU5Hr1G111410.1	Barley	plastid	77.07	79.8
Os03t0811600-01	Rice	nucleus, plastid	78.54	78.92
GSMUA_Achr2P00020_001	Banana	plastid	77.07	75.6
CDX72741	Canola	cytosol	48.78	58.14
CDY47469	Canola	cytosol	48.29	57.89
CDY26779	Canola	cytosol	48.29	57.89
CDY12100	Canola	cytosol	48.29	57.56
CDY22414	Canola	cytosol, extracellular	48.29	57.56
CDX69094	Canola	cytosol	48.29	57.56
CDX90292	Canola	cytosol	48.29	57.56
CDY27248	Canola	cytosol	48.29	54.4
CDX72175	Canola	cytosol	48.29	54.1
CDY58941	Canola	endoplasmic reticulum	47.32	48.26
CDY55458	Canola	endoplasmic reticulum	47.32	48.26
CDY61026	Canola	endoplasmic reticulum	46.83	47.76
CDX71155	Canola	endoplasmic reticulum	46.83	47.76
Zm00001d013010_P002	Maize	plastid	71.22	47.4
CDY52123	Canola	endoplasmic reticulum	46.34	46.57
CDX80340	Canola	endoplasmic reticulum	46.34	46.57
CDX72190	Canola	endoplasmic reticulum	48.29	44.2
CDY27255	Canola	endoplasmic reticulum	48.29	44.2
CDY58761	Canola	plastid	47.8	37.98
CDX76611	Canola	plastid	46.83	37.94
CDY11395	Canola	plastid	47.32	37.6
CDX93994	Canola	plastid	47.8	37.55
CDX69100	Canola	endoplasmic reticulum	40.0	36.61
CDX75476	Canola	endoplasmic reticulum	40.0	36.61
CDX76307	Canola	endoplasmic reticulum	39.02	35.87
CDY17501	Canola	endoplasmic reticulum	38.54	35.11
CDX78508	Canola	plastid	43.41	34.77
CDX70495	Canola	plastid	43.41	34.63
CDY36653	Canola	cytosol	46.83	26.59
CDX71247	Canola	cytosol	46.83	26.59
CDY53714	Canola	nucleus	46.34	17.09
CDX93909	Canola	nucleus	46.34	15.52
CDX68845	Canola	nucleus	39.51	10.59
CDX75243	Canola	nucleus	39.02	10.46

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	GO:A0A078DWK6	EnsemblPlants:CDX93307	ProteinID:CDX93307	ProteinID:CDX93307.1
InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00155279001	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160	PIRSF:PIRSF001467	PRINTS:PR00153
PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF58	SUPFAM:SSF50891	UniParc:UPI0004EE6C28	SEG:seg

Description

BnaC04g45890D

Coordinates

chrLK031875:+:863604..865177

Molecular Weight (calculated)

21916.3 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.169

Length

205 amino acids

Sequence
(BLAST)

001: MSSGGGIVAG PTPASASAHS SGGGNVEWHV RPPNPKNPVV FFDVSIGGIP AGRIKMELFA DIAPKTAENF RQFCTGELRK AGKPLGYKEC QFHRVIKDFM
101: IQSGDFLKND GGGCMSIYGH KFDDESFTAK HTGPGLLSMA NSGPDTNGCQ FFISCAKCDW LDNKHVVFGR VLGDGLLVVR KIENVAVGPN NRPKLAVVIT
201: ECGEM

Best Arabidopsis Sequence Match ( AT2G38730.1 )
(BLAST)

001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM

Arabidopsis Description

CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.