Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74892 | Canola | cytosol, plastid | 98.0 | 96.08 |
| CDX93307 | Canola | plastid | 96.5 | 94.15 |
| AT2G38730.1 | Thale cress | cytosol | 92.5 | 92.96 |
| CDY18371 | Canola | cytosol, plastid | 95.5 | 92.27 |
| KRH13330 | Soybean | endoplasmic reticulum, nucleus | 77.5 | 85.64 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 80.0 | 84.66 |
| KRH37809 | Soybean | nucleus | 81.0 | 83.51 |
| Solyc01g096520.2.1 | Tomato | cytosol, nucleus, plastid | 79.0 | 83.16 |
| PGSC0003DMT400013826 | Potato | cytosol, mitochondrion | 78.5 | 82.63 |
| KRH20677 | Soybean | cytosol | 74.0 | 80.87 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 79.0 | 79.8 |
| TraesCS5B01G478800.1 | Wheat | plastid | 79.0 | 79.8 |
| EER90660 | Sorghum | plastid | 80.0 | 79.6 |
| TraesCS5D01G479900.1 | Wheat | nucleus | 78.5 | 79.29 |
| HORVU5Hr1G111410.1 | Barley | plastid | 78.5 | 79.29 |
| Os03t0811600-01 | Rice | nucleus, plastid | 78.0 | 76.47 |
| GSMUA_Achr2P00020_001 | Banana | plastid | 78.0 | 74.64 |
| CDX72741 | Canola | cytosol | 50.0 | 58.14 |
| CDY26779 | Canola | cytosol | 49.5 | 57.89 |
| CDY47469 | Canola | cytosol | 49.5 | 57.89 |
| CDX90292 | Canola | cytosol | 49.5 | 57.56 |
| CDY22414 | Canola | cytosol, extracellular | 49.5 | 57.56 |
| CDY12100 | Canola | cytosol | 49.5 | 57.56 |
| CDX69094 | Canola | cytosol | 49.0 | 56.98 |
| CDY27248 | Canola | cytosol | 49.5 | 54.4 |
| CDX72175 | Canola | cytosol | 49.5 | 54.1 |
| CDY58941 | Canola | endoplasmic reticulum | 48.5 | 48.26 |
| CDY55458 | Canola | endoplasmic reticulum | 48.5 | 48.26 |
| CDY61026 | Canola | endoplasmic reticulum | 48.0 | 47.76 |
| CDX71155 | Canola | endoplasmic reticulum | 48.0 | 47.76 |
| CDX80340 | Canola | endoplasmic reticulum | 47.5 | 46.57 |
| CDY52123 | Canola | endoplasmic reticulum | 47.5 | 46.57 |
| Zm00001d013010_P002 | Maize | plastid | 70.5 | 45.78 |
| CDX72190 | Canola | endoplasmic reticulum | 49.5 | 44.2 |
| CDY27255 | Canola | endoplasmic reticulum | 49.5 | 44.2 |
| CDY58761 | Canola | plastid | 49.0 | 37.98 |
| CDX76611 | Canola | plastid | 48.0 | 37.94 |
| CDY11395 | Canola | plastid | 48.5 | 37.6 |
| CDX93994 | Canola | plastid | 49.0 | 37.55 |
| CDX75476 | Canola | endoplasmic reticulum | 41.0 | 36.61 |
| CDX69100 | Canola | endoplasmic reticulum | 41.0 | 36.61 |
| CDX76307 | Canola | endoplasmic reticulum | 40.0 | 35.87 |
| CDY17501 | Canola | endoplasmic reticulum | 39.5 | 35.11 |
| CDX78508 | Canola | plastid | 44.5 | 34.77 |
| CDX70495 | Canola | plastid | 44.5 | 34.63 |
| CDY36653 | Canola | cytosol | 48.0 | 26.59 |
| CDX71247 | Canola | cytosol | 48.0 | 26.59 |
| CDY53714 | Canola | nucleus | 47.5 | 17.09 |
| CDX93909 | Canola | nucleus | 47.5 | 15.52 |
| CDX68845 | Canola | nucleus | 39.5 | 10.33 |
| CDX75243 | Canola | nucleus | 39.0 | 10.2 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | GO:A0A078DQB5 | EnsemblPlants:CDX91486 | ProteinID:CDX91486 | ProteinID:CDX91486.1 |
| InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00152843001 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 |
| PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF58 | SUPFAM:SSF50891 | UniParc:UPI0004EE4D33 | : |
Description
BnaC04g06640D
Coordinates
chrLK031867:-:1389704..1391528
Molecular Weight (calculated)
21561.9 Da
IEP (calculated)
8.061
GRAVY (calculated)
-0.174
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGIVAGP TAAPSSGVGN VEWHVRPPNP KNPVVFFDVS IGGIPAGRIK MELFADIAPK TAENFRQFCT GELRKAGKPL GYKECQFHRV IKDFMIQSGD
101: FLKNDGSGCM SIYGHKFDDE NFTAKHTGPG LLSTANSGPD TNGCQFFISC SKCDWLDNKH VVFGRVLGDG LLVVRKIENV AVGPNNRPKL AVVITECGEM
101: FLKNDGSGCM SIYGHKFDDE NFTAKHTGPG LLSTANSGPD TNGCQFFISC SKCDWLDNKH VVFGRVLGDG LLVVRKIENV AVGPNNRPKL AVVITECGEM
001: MNSGGGIVAA AAPSSGGGNV EWHVRPPNPK NPVVFFDVSI GGIPAGRIKM ELFADIAPKT AENFRQFCTG ELRKAGKPLG YKECQFHRVI KDFMVQSGDF
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
101: LKNDGSGCMS IYGHKFEDEN FTAKHTGPGL LSMANSGPNT NGCQFFITCA KCDWLDNKHV VFGRVLGDGL LVMRKIENVA IGPNNRPKLA VVITECGEM
Arabidopsis Description
CYP22Peptidyl-prolyl cis-trans isomerase CYP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.