Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G011100.1 | Wheat | plastid | 83.63 | 95.92 |
| TraesCS1D01G000800.2 | Wheat | plastid | 82.92 | 95.1 |
| TraesCS1A01G007500.1 | Wheat | golgi | 82.92 | 95.1 |
| Zm00001d011104_P001 | Maize | plastid | 72.6 | 82.26 |
| EES17522 | Sorghum | plastid | 72.6 | 81.93 |
| Zm00001d035761_P001 | Maize | plastid | 72.6 | 81.27 |
| Os05t0103200-01 | Rice | plastid | 71.89 | 80.8 |
| GSMUA_Achr2P21150_001 | Banana | plastid | 61.92 | 69.88 |
| Solyc01g009990.2.1 | Tomato | plastid | 57.65 | 65.32 |
| PGSC0003DMT400013412 | Potato | extracellular, plastid | 57.3 | 64.92 |
| KRH36359 | Soybean | nucleus, plastid | 57.65 | 64.54 |
| VIT_01s0146g00110.t01 | Wine grape | plastid | 59.43 | 63.74 |
| KRG93128 | Soybean | nucleus, plastid | 57.3 | 63.64 |
| Bra006182.1-P | Field mustard | plastid | 56.58 | 61.87 |
| CDX78508 | Canola | plastid | 56.23 | 61.72 |
| CDX70495 | Canola | plastid | 56.23 | 61.48 |
| GSMUA_Achr6P16580_001 | Banana | endoplasmic reticulum, mitochondrion | 57.65 | 59.78 |
| AT5G13120.1 | Thale cress | plastid | 54.8 | 59.46 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 37.37 | 55.56 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 39.86 | 54.37 |
| HORVU3Hr1G030750.1 | Barley | plastid | 45.91 | 53.75 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 40.57 | 52.78 |
| HORVU4Hr1G000910.3 | Barley | cytosol | 37.37 | 52.76 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 40.93 | 52.75 |
| HORVU5Hr1G083310.3 | Barley | endoplasmic reticulum | 38.08 | 49.54 |
| HORVU5Hr1G111410.1 | Barley | plastid | 34.52 | 48.99 |
| HORVU7Hr1G036160.1 | Barley | cytosol | 37.37 | 27.63 |
| HORVU6Hr1G077290.1 | Barley | plastid | 37.72 | 23.3 |
| HORVU2Hr1G056230.1 | Barley | nucleus | 30.61 | 13.87 |
| HORVU6Hr1G037500.21 | Barley | nucleus | 28.83 | 9.84 |
Protein Annotations
| MapMan:1.1.8.1.4.5 | MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A0A287EF60 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009533 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0010275 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016853 | GO:GO:0019538 | GO:GO:0031977 | GO:GO:0043424 |
| EnsemblPlantsGene:HORVU1Hr1G000710 | EnsemblPlants:HORVU1Hr1G000710.1 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PRINTS:PR00153 |
| ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF383 | SUPFAM:SSF50891 | UniParc:UPI000B46637C |
| SEG:seg | : | : | : | : | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287EF60]
Coordinates
chrchr1H:+:1910919..1914393
Molecular Weight (calculated)
30059.1 Da
IEP (calculated)
10.341
GRAVY (calculated)
-0.202
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: APNQGNKKAH PFGYLQRVSG FLRPLHRIPS QDLPPRPPMA AATSSFATLA VARPAAAAQR ALLAAKAPSS ALSLRGVGRV ASPALSVSLQ TRARFVASAS
101: AEPYAPELQS KVTNKVYFDI NIGNPVGKNV GRIVIGLYGD DVPQTVENFR ALCTGEKGFG YKGSSFHRVI KDFMIQGGDF DKGNGTGGKS IYGRTFKDEN
201: FQLVHTGPGV LSMANAGPNT NGSQFFICTV KTPWLDGRHV VFGQVLEGMD IVRMIESSET DRGDRPKKKV VISECGELPV V
101: AEPYAPELQS KVTNKVYFDI NIGNPVGKNV GRIVIGLYGD DVPQTVENFR ALCTGEKGFG YKGSSFHRVI KDFMIQGGDF DKGNGTGGKS IYGRTFKDEN
201: FQLVHTGPGV LSMANAGPNT NGSQFFICTV KTPWLDGRHV VFGQVLEGMD IVRMIESSET DRGDRPKKKV VISECGELPV V
001: MATLSMTLSN PKSLSAPPRR LSPINTSAFT STSFRLRTKS SFDSISFSSS TPFSASSLLL HTSYTKRNHR CFSVQSNAEV VTEPQSKITH KVYFDISVGN
101: PVGKLAGRIV IGLYGDDVPQ TVENFRALCT GEKGFGYKGS TFHRVIRDFM IQGGDFEKGN GTGGKSVYGR TFKDENFKLS HVGPGVLSMA NAGPNTNGSQ
201: FFICTIKTSW LDGRHVVFGQ VIEGMEVVKL IEEQETDRGD RPRKKVVIAD CGQLPMSEA
101: PVGKLAGRIV IGLYGDDVPQ TVENFRALCT GEKGFGYKGS TFHRVIRDFM IQGGDFEKGN GTGGKSVYGR TFKDENFKLS HVGPGVLSMA NAGPNTNGSQ
201: FFICTIKTSW LDGRHVVFGQ VIEGMEVVKL IEEQETDRGD RPRKKVVIAD CGQLPMSEA
Arabidopsis Description
PNSL5Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UN74]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.