Factsheet for HORVU6Hr1G037500.21

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G176900.1	Wheat	nucleus	96.72	96.72
TraesCS6B01G208900.2	Wheat	cytosol	96.84	93.88
TraesCS6D01G167200.3	Wheat	cytosol	96.72	93.76
OQU84603	Sorghum	nucleus	69.38	68.63
Zm00001d053620_P016	Maize	nucleus	66.22	66.54
Zm00001d015729_P005	Maize	nucleus	67.56	64.73
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	42.04	50.96
VIT_04s0008g05090.t01	Wine grape	nucleus	48.24	49.87
KRH61803	Soybean	nucleus	49.45	48.28
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	10.94	47.62
KRH52477	Soybean	nucleus	49.09	47.53
HORVU4Hr1G000910.3	Barley	cytosol	11.3	46.73
Solyc08g067090.2.1	Tomato	nucleus	44.84	45.61
HORVU6Hr1G012570.2	Barley	cytosol	11.3	45.15
CDX68845	Canola	nucleus	41.92	45.1
HORVU5Hr1G111410.1	Barley	plastid	10.81	44.95
Bra011346.1-P	Field mustard	nucleus	42.04	44.82
CDX75243	Canola	nucleus	41.31	44.44
AT4G32420.6	Thale cress	nucleus	44.59	43.85
GSMUA_Achr10P...	Banana	nucleus	44.23	43.75
PGSC0003DMT400059575	Potato	nucleus	36.82	43.41
GSMUA_Achr2P15900_001	Banana	nucleus	42.89	42.48
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	10.69	40.74
HORVU7Hr1G095720.2	Barley	mitochondrion	10.69	40.37
KRH15996	Soybean	nucleus	40.95	39.69
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	10.09	38.43
HORVU2Hr1G056230.1	Barley	nucleus	28.68	38.06
HORVU3Hr1G030750.1	Barley	plastid	9.84	33.75
HORVU7Hr1G036160.1	Barley	cytosol	14.22	30.79
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	9.84	28.83
HORVU6Hr1G077290.1	Barley	plastid	14.58	26.37

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	ncoils:Coil	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
EnsemblPlantsGene:HORVU6Hr1G037500	EnsemblPlants:HORVU6Hr1G037500.21	InterPro:IPR002130	InterPro:IPR029000	UniProt:M0WSX7	PFAM:PF00160
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF255	SUPFAM:SSF50891
UniParc:UPI00029598DA	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:187971909..187979253

Molecular Weight (calculated)

91970.6 Da

IEP (calculated)

12.074

GRAVY (calculated)

-1.379

Length

823 amino acids

Sequence
(BLAST)

001: MTIEKMGRKK NPIVFLDVSI GDGPDERMIF ELFANVAPLT AENFRALCTG EMGIGQTTKK PLYYKGSTFH RVIKGFMAQG GDFSNGDGNG GESIYGEQFE
101: DENFVLRHDD RGLLSMANAG RNTNGSQFFI TFKPNSHLDR KNTVFGKLIL GNDVLKRIEH VDVDGSTNKP IVPVRIVDCG QLVDGKGRGY GSTENDKKKV
201: KSKLSIDSSE DEGNEEKHKS RRKKSSKRRK KKRRYSSSES ESSSESESSD SESESDNSSE SSDISSSSDD KRRRRKRHSK KDKRKHGKRR RDRRREKRRR
301: KRDRKSKQKS KRMVESDSET GNASDSSSED ARRKRQRHGR KSKATSQISA EDHTAVAALK DATSTQEKIG TPRSLAQEDK SQLENGEMRT NGVTDSKSER
401: KASIVPVLTG NRSKSRSQST SANHSMSKSM SVSPRSPIKR SNVSLERLVS PSPVHQRSRS PVHAPKQKES RSPPRQRNMS MSPHRRSPSK SPPGSASRSP
501: VVRRNRSPVE TRTRSISRSS ARSLQRRSPS RSPERTRVRK SVSPSPTPME KGKSISRTSA RSPLHKGFSR SPDMPPRKTT SRSPQRNAHR NFSKSPVGSS
601: RRSLTPVRGG RSRRNASRSP SPPRRAVSPP NHGRSPSRSV SPDGSKRIRR GRGFTQRYSF ARQYRSPSVD RSHRYGGRGD RDRYISHRGT RYRSPPRRYR
701: SPPRRASPRP GRYRRRSRSV SRSPPAYRDR ARGGGYSRSP LRSRSPPGGK PSSHGGRARS LSRSRSLSGS RSRSPPPVQD RSPLASPSPK RASNDRSRSM
801: SVSPEGKKGL VSYGDGSPDS AGK

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.