Factsheet for GSMUA_Achr10P27100_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	64.9	79.53
GSMUA_Achr2P15900_001	Banana	nucleus	66.23	66.31
GSMUA_Achr3P12630_001	Banana	plasma membrane, unclear	10.94	60.26
GSMUA_Achr7P17320_001	Banana	endoplasmic reticulum	12.5	49.76
GSMUA_Achr10P...	Banana	endoplasmic reticulum	11.78	49.25
VIT_04s0008g05090.t01	Wine grape	nucleus	46.03	48.12
GSMUA_Achr7P04880_001	Banana	cytosol	10.7	45.88
GSMUA_Achr2P00020_001	Banana	plastid	11.3	44.98
KRH52477	Soybean	nucleus	45.91	44.94
KRH61803	Soybean	nucleus	45.19	44.6
HORVU6Hr1G037500.21	Barley	nucleus	43.75	44.23
TraesCS6A01G176900.1	Wheat	nucleus	43.39	43.86
Solyc08g067090.2.1	Tomato	nucleus	42.07	43.26
OQU84603	Sorghum	nucleus	43.03	43.03
CDX68845	Canola	nucleus	39.54	43.01
TraesCS6B01G208900.2	Wheat	cytosol	43.75	42.87
TraesCS6D01G167200.3	Wheat	cytosol	43.51	42.64
GSMUA_Achr1P07610_001	Banana	endoplasmic reticulum	11.06	42.59
CDX75243	Canola	nucleus	38.82	42.22
Zm00001d053620_P016	Maize	nucleus	41.35	42.0
Bra011346.1-P	Field mustard	nucleus	38.94	41.97
Zm00001d015729_P005	Maize	nucleus	41.83	40.51
PGSC0003DMT400059575	Potato	nucleus	33.77	40.26
AT4G32420.6	Thale cress	nucleus	40.38	40.14
GSMUA_Achr5P03050_001	Banana	nucleus	33.41	40.06
KRH15996	Soybean	nucleus	39.66	38.87
GSMUA_Achr2P21150_001	Banana	plastid	11.18	37.35
GSMUA_Achr8P23380_001	Banana	cytosol	15.99	34.46
GSMUA_Achr6P16580_001	Banana	endoplasmic reticulum, mitochondrion	11.18	34.32
GSMUA_Achr5P05580_001	Banana	cytosol	15.87	33.67

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006457	GO:GO:0006464
GO:GO:0006606	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008565	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	GO:GO:0061608	EnsemblPlantsGene:GSMUA_Achr10G27100_001	EnsemblPlants:GSMUA_Achr10P27100_001	EnsemblPlants:GSMUA_Achr10T27100_001
InterPro:IPR002130	InterPro:IPR002652	InterPro:IPR029000	InterPro:Importin-a_IBB	UniProt:M0RLT4	PFAM:PF00160
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PFscan:PS51214	PANTHER:PTHR11071	PANTHER:PTHR11071:SF255
SUPFAM:SSF50891	UniParc:UPI00029613CB	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G27100_001]

Coordinates

chr10:-:30346253..30357417

Molecular Weight (calculated)

93047.5 Da

IEP (calculated)

11.939

GRAVY (calculated)

-1.345

Length

832 amino acids

Sequence
(BLAST)

001: MAKKNNPIVF LDVAIDGKAA GRMVFELFAD IVPKTAENFR ALCTGEMGIG PTTKKPLHYK GSVFHRIIKG FMAQGGDFSR RDGTGGESIY GGKFSDENFV
101: LNHDGRGLLS MANAGRDANG SQFFITFNSA PHLNGKHVIF GKLILGHETL KNIENVDVDG DRPVALVKIV NCGELCENVA VVHENDKKKD SKSKQVKDAS
201: DDSRRRGRHK KSSKGRRKWK RKRYYSSESD SSSDAETETS DTDSDSDSDT SSMSDVSSSS DDRRHKRRKY SKRDKYKRGK RKRDRGQEKR RRKRERKLRH
301: KLRRIMESES ETESTDGSSS HDDGYHKRRV RKSKVSSHVS DEKQSLLPVE REIITDLPDE GTIPEKPVGE EAKSQRENGE LQSNGITEPT SGRDMDQLPG
401: SEGHKSRSQS MSPNQSMSKS MSISPRRSPN GSQSPRRSAS RSPGTRDLDG SPDHVSRKSS MSRSPPRRST SRSPFRRTIS RSPIRIVINK NPVGLTGKSK
501: SRSPVKVHSR SASKSPAKSL QQRNLSGSQD KTPIRRSLNR SPVNEKRRSI SRSSGRSLQQ RSPSRSPVKA RRSVSRSPER SRSRSKSHSP VQARSRPSIS
601: RNQGSPVHRA ASPPSNRRRS LSRSVSPDGS PKRIRRGRGF SQQYSFARRY RTPSPDRSPV RLHRYGGRND RDRYSSYRSY HNRSPPRRYR SPPRGRTPPR
701: YRSRRSPTRS ISRSPVGYRG RARGGYSISP ARSPSQASEK PRSRGARDSI RPEKRVSVSK SRSPSGSRSR SRSRSSSRSG SSSRSKSRSR SSQDTPSPKR
801: ASKEQSRSPS TSSHGKKGLV SYGDGSPDSG GR

Best Arabidopsis Sequence Match ( AT4G32420.6 )
(BLAST)

001: MAKKKNPQVF MDVSIDGDPA ETMVFELFPE VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRIMKG SSAQAGDFVN RNGTAGESIY AGKFPDESPK
101: LRHEETGLLS MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK
201: RRRHSSSESE SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS
301: DVNVEIGAKK RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ
401: SKSPSSSPRW NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS
501: PVRSASRGSL GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV
601: RSSRKSVSRS PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD
701: RSPYRFSDRS DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG
801: KARSVSRSPS KARSPSKSDS TSSDNSPGGK KGLVAYD

Arabidopsis Description

CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.