CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053620_P016	Maize	nucleus	87.14	88.52
Zm00001d015729_P005	Maize	nucleus	87.62	84.87
TraesCS6A01G176900.1	Wheat	nucleus	68.75	69.5
HORVU6Hr1G037500.21	Barley	nucleus	68.63	69.38
TraesCS6D01G167200.3	Wheat	cytosol	68.63	67.26
TraesCS6B01G208900.2	Wheat	cytosol	68.39	67.02
VIT_04s0008g05090.t01	Wine grape	nucleus	48.2	50.38
EES04388	Sorghum	cytosol	10.34	50.29
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	40.62	49.78
EES05164	Sorghum	cytosol	10.22	49.42
EER96387	Sorghum	cytosol	10.1	48.0
KRH61803	Soybean	nucleus	48.08	47.45
Solyc08g067090.2.1	Tomato	nucleus	45.55	46.85
KRH52477	Soybean	nucleus	47.6	46.59
PGSC0003DMT400059575	Potato	nucleus	37.86	45.13
EER91725	Sorghum	cytosol	10.1	44.21
CDX68845	Canola	nucleus	40.14	43.66
CDX75243	Canola	nucleus	40.02	43.53
Bra011346.1-P	Field mustard	nucleus	40.38	43.52
GSMUA_Achr10P...	Banana	nucleus	43.03	43.03
AT4G32420.6	Thale cress	nucleus	43.03	42.77
GSMUA_Achr2P15900_001	Banana	nucleus	41.71	41.76
KRH15996	Soybean	nucleus	41.47	40.64
EER90660	Sorghum	plastid	9.5	39.3
OQU77068	Sorghum	endoplasmic reticulum	9.86	38.5
EER97099	Sorghum	endoplasmic reticulum	9.25	35.65
EER95944	Sorghum	nucleus	26.92	34.57
OQU77069	Sorghum	mitochondrion	9.13	34.55
EES00602	Sorghum	plastid	9.74	33.47
EER88932	Sorghum	endoplasmic reticulum	8.65	32.58
EER88931	Sorghum	endoplasmic reticulum	8.65	32.58
EES17522	Sorghum	plastid	9.01	30.12
EER88080	Sorghum	cytosol	13.58	29.05
EES05845	Sorghum	cytosol	12.98	27.27

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A1Z5RLI8	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
InterPro:IPR002130	InterPro:IPR029000	EnsemblPlants:OQU84603	ProteinID:OQU84603	ProteinID:OQU84603.1	PFAM:PF00160
PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF255	EnsemblPlantsGene:SORBI_3004G086200
SUPFAM:SSF50891	UniParc:UPI000B4264E8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:7155714..7166846

Molecular Weight (calculated)

93027.2 Da

IEP (calculated)

12.194

GRAVY (calculated)

-1.296

Length

832 amino acids

Sequence
(BLAST)

001: MGRKRNPIVF LDVSVGDEPD ERMIFELFAD VAPLTTENFR ALCTGELGIG QKTKKPLCYK GSSFHRVIKG FMAQGGDIAK GNGSGGESIY SGKFADETCV
101: LPHDDRGLLT TADTGSKASG SQFCITFKPN SHLDRKHTVF GKLVVGSDIL KRIEQVDVQS PDSTPVVPVT IVNCGELTDR KDLGSMTIEI DKKRAAKSKS
201: SKDISSDEES NEGQHKGRRH KSSKRRRKKK RYSYSESDSS SESETESSDS ESDSDTYSSD SSDVSSSSDD RRRRRKRHSK KNKRKRSRRK RDHRRERRRR
301: KRDRKSKHKS KRIIKGDSEA ESTSDSSSED DRSKRHRRGR KSKASSQVSE ENLAAVAALK DAISPQQKSG IPRSPAQDVS TLQNGEIHTN GVNESKIERS
401: AAVMPVLTGN RSKSRSQSMS ANHSMSKSMS ISPRRSPMKR SITSPKRSVS RSPVHHNRIV RTPKRSESRS PARRQSISRS PARSLSKSSP RGASRSPHII
501: RSPVEAHRRS ISRSSARSMQ QRSPSRSLER THVRKSVSPS PPLEKRRSIT RNSVISPLRS VSRSPARISR SPHRPSRRSP MRSPRRNIRR SLSRSPVRTL
601: RRSVSRSPVR GGRPRRNISR SPSPHRRAVT PPNNGRSPSR SDSPDGSPKR IRRGRGFTQR YSFARQYRSP SADRSHRYGG RNDRDRYMGY RGSRHRSPPR
701: RYRSPPRGRM PSPRRSRYRR RSRSASRSPV HRERGRGGGY SKSPVRSLSP PPRPRSHGDR ARSVSRSHLS GSRSRSPPAL HPSPPDSPSL KRASVEKSQS
801: PSRSPSLSGS PSRGGNKGLV SYGDGSPDSA GK

Best Arabidopsis Sequence Match ( AT4G32420.6 )
(BLAST)

001: MAKKKNPQVF MDVSIDGDPA ETMVFELFPE VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRIMKG SSAQAGDFVN RNGTAGESIY AGKFPDESPK
101: LRHEETGLLS MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK
201: RRRHSSSESE SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS
301: DVNVEIGAKK RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ
401: SKSPSSSPRW NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS
501: PVRSASRGSL GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV
601: RSSRKSVSRS PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD
701: RSPYRFSDRS DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG
801: KARSVSRSPS KARSPSKSDS TSSDNSPGGK KGLVAYD

Arabidopsis Description

CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.