Factsheet for TraesCS6A01G176900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G037500.21	Barley	nucleus	96.72	96.72
TraesCS6B01G208900.2	Wheat	cytosol	97.81	94.82
TraesCS6D01G167200.3	Wheat	cytosol	97.69	94.7
OQU84603	Sorghum	nucleus	69.5	68.75
Zm00001d053620_P016	Maize	nucleus	66.59	66.91
Zm00001d015729_P005	Maize	nucleus	67.8	64.96
TraesCS6A01G068900.1	Wheat	cytosol	11.42	54.97
TraesCS6A01G405900.1	Wheat	cytosol	11.06	54.49
GSMUA_Achr9P28600_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	42.04	50.96
TraesCS4A01G312600.1	Wheat	cytosol, mitochondrion, plastid	11.06	50.56
VIT_04s0008g05090.t01	Wine grape	nucleus	48.24	49.87
KRH61803	Soybean	nucleus	49.09	47.92
KRH52477	Soybean	nucleus	48.85	47.29
TraesCS5A01G467000.1	Wheat	golgi, unclear	11.06	45.96
Solyc08g067090.2.1	Tomato	nucleus	44.96	45.74
CDX68845	Canola	nucleus	41.8	44.97
Bra011346.1-P	Field mustard	nucleus	41.8	44.56
CDX75243	Canola	nucleus	41.19	44.31
AT4G32420.6	Thale cress	nucleus	44.71	43.97
PGSC0003DMT400059575	Potato	nucleus	36.82	43.41
GSMUA_Achr10P...	Banana	nucleus	43.86	43.39
GSMUA_Achr2P15900_001	Banana	nucleus	42.41	42.0
TraesCS7A01G410100.2	Wheat	mitochondrion	10.94	41.28
KRH15996	Soybean	nucleus	41.07	39.81
TraesCS5A01G328900.1	Wheat	endoplasmic reticulum	10.21	38.89
TraesCS6A01G405800.1	Wheat	cytosol	11.3	37.65
TraesCS2A01G237700.1	Wheat	nucleus	28.68	36.7
TraesCS3A01G151100.1	Wheat	plastid	10.21	35.0
TraesCS1A01G007500.1	Wheat	golgi	10.09	33.88
TraesCS7A01G175300.1	Wheat	cytosol	14.09	30.61
TraesCS6A01G313700.1	Wheat	cytosol	14.58	29.56

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS	InterPro:Cyclophilin-type_PPIase_dom
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006457	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	InterPro:IPR002130	InterPro:IPR029000
PFAM:PF00160	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF255
SUPFAM:SSF50891	EnsemblPlantsGene:TraesCS6A01G176900	EnsemblPlants:TraesCS6A01G176900.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:+:196186964..196193577

Molecular Weight (calculated)

92032.7 Da

IEP (calculated)

12.027

GRAVY (calculated)

-1.354

Length

823 amino acids

Sequence
(BLAST)

001: MTIEKMGRKK NPIVFLDVSI GDGPDERMIF ELFANVAPLT AENFRALCTG EMGIGQSTKK PLYYKGSTFH RVIKGFMAQG GDFSNGDGNG GESIYGEQFE
101: DENFVLRHDD RGLLSMANAG RNTNGSQFFI TFKPNSHLDR KNTVFGKLIL GNDVLKRIEH VDVDGSTNKP IVPVRIVDCG ELVDGKGRGS FSTENDKKKV
201: KSKLSIDSSE DEGNEEKHKG RRKKSLKRRK KKRRYSSSES ETSSESESSD SESESDYSSE SSDISSSSDD KRRRRKRHSK KDKRKHGKRR RDRRREKRRR
301: KRDRKSKQKS KRMVESDSET GNASDGSSED ARRKRQRHGR KSKATSQISA EDHTAVAALK DATSTQEKIG TPRSLAQEDK SPLENGEMRT NGVTDSKSER
401: KAGIMPVLTG NRSKSRSQST SANHSMSKSM SVSPRSPIKR SNVSLERLVS PSPVHQRSRS PVHASKQKES RSPPGQRNMS MSPHRRSPSK SPPGRASRRP
501: VVRRNRSPVE VRTRSISRSS ARSLQRRSPS RSPERTHVRK SVSPSPTPME KGKSISRTSA RSPLHKGFSR SPDMPPRKTT SRSPQRNAHR NFSRSPVGSS
601: RRSLTPVRGG RSRRNASRSP SPPRRAVSPP NHGRSPSRSV SPDGSKRIRR GRGFTQRYSF ARQYRSPSVD RSHRYGGRGD RDRYISHRGT RYRSPPRRYR
701: SPPRRASPRS SRYRRRSRSV SRSPPAYRDR ARGGGYSRSP VRSRSPPAGK PSSRGDRARS LSRSRSLSGS RSRSPPPVQD CSPLASPSPK HASNDRSRSM
801: SVSPEGKKGL VSYGDGSPDS AGK

Best Arabidopsis Sequence Match ( AT3G63400.1 )
(BLAST)

001: MTKKKNPNVF LDVSIGGDPV QRIVIELFAD VVPKTAENFR ALCTGEAGVG KSTGKPLHFK GSSFHRVIKG FMAQGGDFSN GNGTGGESIY GGKFSDENFR
101: LDHDGAGVLS MANCGPNTNG SQFFILFKRQ PHLDGKHVVF GKVVEGMAVI KKMELVGTSD GKPTSPVKII DCGETSQIRA HDAAEREKGK SKKSNKNFSP
201: GDVSDREAKE TRKKESNEKR IKRKRRYSSS DSYSSSSDSD SDSESEAYSS SSYESSSSSD GKHRKRKSTT RHKGRRGERK SKGRSGKKKA RPDRKPSTNS
301: SSDTESSSSS DDEKVGHKAI KSVKVDNADQ HANLDDSVKS RSRSPIRRRN QNSRSKSPSR SPVRVLGNGN RSPSRSPVRD LGNGSRSPRE KPTEETVGKS
401: FRSPSPSGVP KRIRKGRGFT ERYSFARKYH TPSPERSPPR HWPDRRNFQD RNRDRYPSNR SYSERSPRGR FRSPPRRRSP PRYNRRRRST SRSPDGYRRR
501: LRDGSRSQSP RHRSRSQSPR KRQPISQDLK SRLGPQRSPI RGGRTSPAES LSPSHSPSPP GKRGLVSYAD

Arabidopsis Description

CYP63Peptidyl-prolyl cis-trans isomerase CYP63 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY75]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.