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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61803 Soybean nucleus 62.19 62.63
KRH52477 Soybean nucleus 61.25 61.18
KRH60719 Soybean cytosol, endoplasmic reticulum, mitochondrion 10.84 53.49
VIT_04s0008g05090.t01 Wine grape nucleus 49.94 53.27
KRH29120 Soybean endoplasmic reticulum, nucleus 10.72 52.91
KRH51416 Soybean cytosol 10.72 52.91
KRG97056 Soybean cytosol 10.84 52.57
KRH24153 Soybean endoplasmic reticulum, mitochondrion, nucleus 10.6 52.33
KRH68802 Soybean cytosol 10.72 52.0
Solyc08g067090.2.1 Tomato nucleus 48.41 50.8
Bra011346.1-P Field mustard nucleus 43.93 48.32
CDX75243 Canola nucleus 42.76 47.45
PGSC0003DMT400059575 Potato nucleus 38.99 47.42
CDX68845 Canola nucleus 42.52 47.19
AT4G32420.6 Thale cress nucleus 45.35 46.0
GSMUA_Achr9P28600_001 Banana endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 34.86 43.59
KRG98290 Soybean endoplasmic reticulum 10.37 43.14
KRH30309 Soybean endoplasmic reticulum 10.37 43.14
KRH13330 Soybean endoplasmic reticulum, nucleus 9.07 42.54
OQU84603 Sorghum nucleus 40.64 41.47
Zm00001d053620_P016 Maize nucleus 39.93 41.39
TraesCS6A01G176900.1 Wheat nucleus 39.81 41.07
HORVU6Hr1G037500.21 Barley nucleus 39.69 40.95
KRH37809 Soybean nucleus 9.31 40.72
KRH20677 Soybean cytosol 8.72 40.44
Zm00001d015729_P005 Maize nucleus 40.75 40.28
TraesCS6D01G167200.3 Wheat cytosol 39.69 39.69
TraesCS6B01G208900.2 Wheat cytosol 39.69 39.69
GSMUA_Achr10P... Banana nucleus 38.87 39.66
KRG97736 Soybean endoplasmic reticulum 10.72 38.72
KRH31143 Soybean endoplasmic reticulum 10.6 37.82
GSMUA_Achr2P15900_001 Banana nucleus 36.75 37.55
KRH67275 Soybean nucleus 27.68 35.18
KRG95597 Soybean nucleus 27.21 35.05
KRH29272 Soybean endoplasmic reticulum 9.42 33.9
KRH60706 Soybean endoplasmic reticulum 9.07 33.19
KRH24294 Soybean endoplasmic reticulum 9.19 33.05
KRG93128 Soybean nucleus, plastid 9.54 32.02
KRG96627 Soybean nucleus, plastid 9.78 31.92
KRH57738 Soybean cytosol, nucleus 13.43 31.67
KRH36359 Soybean nucleus, plastid 9.19 31.08
KRH04660 Soybean cytosol, nucleus 12.96 30.56
KRH33684 Soybean nucleus, plastid 9.31 30.04
KRH50243 Soybean cytosol 12.49 29.36
KRH71172 Soybean cytosol 12.37 29.09
KRH68358 Soybean plastid 7.66 27.54
Protein Annotations
MapMan:18.12.1Gene3D:2.40.100.10UniProt:A0A0R0GCC6EMBL:ACUP02008751ncoils:CoilInterPro:Cyclophilin-like_dom_sf
InterPro:Cyclophilin-type_PPIaseInterPro:Cyclophilin-type_PPIase_domEnsemblPlantsGene:GLYMA_14G125200GO:GO:0000413GO:GO:0003674GO:GO:0003755
GO:GO:0003824GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016853
GO:GO:0019538InterPro:IPR002130InterPro:IPR029000EnsemblPlants:KRH15996ProteinID:KRH15996ProteinID:KRH15996.1
PFAM:PF00160PRINTS:PR00153PFscan:PS50072PANTHER:PTHR11071PANTHER:PTHR11071:SF255SUPFAM:SSF50891
UniParc:UPI0006EE00F4SEG:seg::::
Description
hypothetical protein
Coordinates
chr14:-:19828597..19836960
Molecular Weight (calculated)
96172.8 Da
IEP (calculated)
12.121
GRAVY (calculated)
-1.305
Length
849 amino acids
Sequence
(BLAST)
001: MAKKKNPLVF MDVSIDGDPV ERMVFELFYD IAPKTAENFR ALCTGEKGVG PNTRKSLHYK GSFFHRIKGS FAQLSKLQAL FHFHDSYDNG TGGESIYGSK
101: FPDESPRLKH DGPGLLSMAV ADRDMLGSHF TLTFKADPHL DRKHVVFGKL VQGHDVLKKI EEVGDEEGLP SVTVKIINCG EHNEDGKKIN KSKKVRDGSS
201: KTNSHEVPHK GKHKKSRADR RRKYYSSESD SSSDLDMESS ESNSDSDSDV SSSSYTSSSS DDRRRKRKRS RKNKLRRGKR RDKHRDKRQR KQDKRSKLRS
301: RRELASHTNS DSGSRSDNNS DGKSGAAQAK DKKHKGHSQR HAEGQPSVVA EKELHHMHLE KREKPNMLEE EEFPKENGEW HSNSTGANHR SDRREGRQPD
401: VMDDQLGKSR NQSRSPKRTM SMSISPRSDR KSPSIDPKRR LSRSPGGSRS PHAPLWRSLS RSPNRRSIKR SPVRGRKGRS VSRSPVSTHN HGSISRSPVR
501: SRDHRSGSAS SVKSLSQGRR RSLPRAPSRR SISRSPVKSH GHRILSRSPV RSRGHRSVSA SPVGSLSRSH RSSPRAPSQR SISRSPVRTQ NHRSVSRSPV
601: RSCDHRIVSA SPVRSLSRSC QRSSPREPSC RSISRSPVRT CSDKSVSRSP MGSHGNRNGS ASPVRSLYLS HRRSSPRAPS GRSISRSPVR VSRKSISRNP
701: VRSSARSLSR SSGRVPLRSI SRSSVRAPSR VNRRSYSRSR SPVCRARTPR GRSLSRSVSP DVSPKRIRRG RGFNERYSYA RRYRTPSQSP PMRSYRYSGY
801: SGRSDRDRYS SYRRYSPRRN RSPLPCRRTP PRFRSRRSRT PFISRSPRY
Best Arabidopsis Sequence Match ( AT4G32420.6 )
(BLAST)
001: MAKKKNPQVF MDVSIDGDPA ETMVFELFPE VAPKTSENFR ALCTGEKGIG PRSGKPLHYK GSFFHRIMKG SSAQAGDFVN RNGTAGESIY AGKFPDESPK
101: LRHEETGLLS MSIADRDKFG SHFHITFRPN QQLDRNNVVF GKLIQGKEIL KKIERVGDEE GKPTVSVKII RCGEYSGDKK KSDGKKNGKH KKSLRVRRKK
201: RRRHSSSESE SSSDSETDSS ESDSESDSDL SSPSFLSSSS HERQKKRKRS SKKDKHRRSK QRDKRHEKKR SMRDKRPKRK SRRSPDSLED SNSGSEASLS
301: DVNVEIGAKK RKHRVSRRTG NSAPAVEKEA ESLHQGKRKG PDLLENRGLR SNGISDAASE QISDRQPDIV DDHPSKSRSR SLSPKRTVSK STSVSPRRSQ
401: SKSPSSSPRW NGGRSPAKGS RQVKNLTNSR RESPGSEEKG RHVRRSPTKS VSRSPVRVKK ERDISRSPSK SLSRSPLRSP KRVISRSPVR GRIARSPSRS
501: PVRSASRGSL GRGPLRRSSR RSPSRSPVRS SRRSLSRSPI QLSRRSLSRS PTRLSRRSLS RSPIRSPRKS VSRSPVRSSR KSVSRSPVRS SRRRISRSPV
601: RSSRKSVSRS PIRLSRRSIS RSPIRLSRRS ISRSPVRGRR RISRSPVPAR RRSVRPRSPP PDRRRSLSRS ASPNGRIRRG RGFSQRFSYA RRYRTSPSPD
701: RSPYRFSDRS DRDRFRSRRR FSPSRFRSPL RGRTPPRYRR RSRSVSPGLC YRNRRYSRSP IRSRSPPYRK RRSPSASHSL SPSRSRSRSK SYSKSPIGTG
801: KARSVSRSPS KARSPSKSDS TSSDNSPGGK KGLVAYD
Arabidopsis Description
CYP95Peptidyl-prolyl cis-trans isomerase CYP95 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.