Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G068900.1 | Wheat | cytosol | 81.44 | 79.53 |
| EES04388 | Sorghum | cytosol | 79.04 | 77.19 |
| Zm00001d050635_P001 | Maize | plastid | 77.84 | 76.02 |
| EES05164 | Sorghum | cytosol | 77.84 | 75.58 |
| Zm00001d016661_P001 | Maize | plastid | 77.25 | 75.0 |
| Zm00001d016660_P001 | Maize | cytosol | 77.25 | 75.0 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 75.45 | 73.68 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 75.45 | 73.26 |
| KRH51416 | Soybean | cytosol | 75.45 | 73.26 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 75.45 | 73.26 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 74.85 | 72.67 |
| CDY47469 | Canola | cytosol | 74.25 | 72.51 |
| Bra037296.1-P | Field mustard | cytosol | 74.25 | 72.51 |
| PGSC0003DMT400004125 | Potato | extracellular | 74.25 | 72.51 |
| CDY26779 | Canola | cytosol | 73.65 | 71.93 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 64.67 | 71.52 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 73.65 | 71.51 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 80.84 | 71.43 |
| Bra010728.1-P | Field mustard | cytosol | 73.05 | 70.93 |
| CDX90292 | Canola | cytosol | 73.05 | 70.93 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 73.05 | 70.93 |
| CDY12100 | Canola | cytosol | 73.05 | 70.93 |
| PGSC0003DMT400011344 | Potato | cytosol | 73.05 | 70.93 |
| CDY22414 | Canola | cytosol, extracellular | 72.46 | 70.35 |
| Bra033574.1-P | Field mustard | cytosol | 72.46 | 70.35 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 72.46 | 70.35 |
| CDX72741 | Canola | cytosol | 72.46 | 70.35 |
| Bra011568.1-P | Field mustard | cytosol | 71.86 | 70.18 |
| AT2G21130.1 | Thale cress | cytosol | 73.05 | 70.11 |
| AT4G38740.1 | Thale cress | cytosol | 71.86 | 69.77 |
| CDX69094 | Canola | cytosol | 71.26 | 69.19 |
| AT2G16600.1 | Thale cress | cytosol | 71.26 | 68.79 |
| AT4G34870.1 | Thale cress | cytosol | 69.46 | 67.44 |
| TraesCS4A01G312600.1 | Wheat | cytosol, mitochondrion, plastid | 67.66 | 62.78 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 77.25 | 58.9 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 80.84 | 54.66 |
| TraesCS7A01G410100.2 | Wheat | mitochondrion | 66.47 | 50.92 |
| TraesCS5A01G467000.1 | Wheat | golgi, unclear | 56.89 | 47.98 |
| TraesCS5A01G328900.1 | Wheat | endoplasmic reticulum | 57.48 | 44.44 |
| TraesCS1A01G007500.1 | Wheat | golgi | 59.88 | 40.82 |
| TraesCS3A01G151100.1 | Wheat | plastid | 57.48 | 40.0 |
| TraesCS7A01G175300.1 | Wheat | cytosol | 59.28 | 26.12 |
| TraesCS6A01G313700.1 | Wheat | cytosol | 59.28 | 24.38 |
| TraesCS2A01G237700.1 | Wheat | nucleus | 58.68 | 15.24 |
| TraesCS6A01G176900.1 | Wheat | nucleus | 54.49 | 11.06 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF403 | SUPFAM:SSF50891 | EnsemblPlantsGene:TraesCS6A01G405900 | EnsemblPlants:TraesCS6A01G405900.1 | TIGR:cd01926 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:611541075..611541578
Molecular Weight (calculated)
17717.5 Da
IEP (calculated)
7.454
GRAVY (calculated)
0.035
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFFDVTIGG APAGRIVMEL FAKDVPKTAE NFRALCTGEK GIGKSGEPLH YKGSAFHRVI PDFVIQGGDF TRGNGTGGES IYGGKFSDEN FIRKHIKPGM
101: VSMANAGPDT NGSNFFICTV PCALLDGKHV VFGEVVEGMD VLKNIEKVGS RSGMCAKSVI IADIGQL
101: VSMANAGPDT NGSNFFICTV PCALLDGKHV VFGEVVEGMD VLKNIEKVGS RSGMCAKSVI IADIGQL
001: MATNPKVYFD MTVGGKSAGR IVMELYADTT PETAENFRAL CTGERGIGKQ GKPLHYKGSS FHRVIPKFMC QGGDFTAGNG TGGESIYGSK FKDENFIKKH
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
101: TGPGILSMAN AGANTNGSQF FICTEKTSWL DGKHVVFGQV VEGLNVVRDI EKVGSDSGRT SKPVVIADCG QIS
Arabidopsis Description
CYP19-1Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.