Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 84.3 | 84.3 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 83.14 | 83.63 |
| EES04388 | Sorghum | cytosol | 82.56 | 83.04 |
| PGSC0003DMT400004125 | Potato | extracellular | 82.56 | 83.04 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 71.51 | 81.46 |
| Bra033574.1-P | Field mustard | cytosol | 81.4 | 81.4 |
| CDX72741 | Canola | cytosol | 81.4 | 81.4 |
| CDY22414 | Canola | cytosol, extracellular | 81.4 | 81.4 |
| EES05164 | Sorghum | cytosol | 81.4 | 81.4 |
| Zm00001d050635_P001 | Maize | plastid | 80.81 | 81.29 |
| AT4G38740.1 | Thale cress | cytosol | 80.81 | 80.81 |
| Zm00001d016661_P001 | Maize | plastid | 80.81 | 80.81 |
| Zm00001d016660_P001 | Maize | cytosol | 80.81 | 80.81 |
| Os02t0121300-01 | Rice | extracellular | 80.81 | 80.81 |
| AT2G21130.1 | Thale cress | cytosol | 81.4 | 80.46 |
| Bra010728.1-P | Field mustard | cytosol | 80.23 | 80.23 |
| CDX90292 | Canola | cytosol | 80.23 | 80.23 |
| CDY12100 | Canola | cytosol | 80.23 | 80.23 |
| TraesCS6A01G068900.1 | Wheat | cytosol | 79.65 | 80.12 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 79.65 | 80.12 |
| PGSC0003DMT400011344 | Potato | cytosol | 79.65 | 79.65 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 79.65 | 79.65 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 79.07 | 79.53 |
| TraesCS6A01G405900.1 | Wheat | cytosol | 73.26 | 75.45 |
| VIT_14s0081g00700.t01 | Wine grape | cytosol | 75.58 | 74.71 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 73.84 | 67.2 |
| HORVU6Hr1G012570.2 | Barley | cytosol | 79.65 | 66.5 |
| VIT_06s0004g06610.t01 | Wine grape | endoplasmic reticulum | 68.02 | 58.5 |
| TraesCS6B01G450300.1 | Wheat | cytosol | 69.19 | 54.34 |
| VIT_13s0084g00620.t01 | Wine grape | cytosol | 59.3 | 53.97 |
| TraesCS6B01G450400.1 | Wheat | cytosol | 68.02 | 53.42 |
| TraesCS6A01G405800.1 | Wheat | cytosol | 72.67 | 50.61 |
| VIT_13s0067g00870.t01 | Wine grape | endoplasmic reticulum | 63.95 | 48.25 |
| VIT_03s0038g02200.t01 | Wine grape | endoplasmic reticulum | 56.4 | 43.5 |
| VIT_07s0005g02410.t01 | Wine grape | plastid | 61.05 | 41.5 |
| VIT_01s0146g00110.t01 | Wine grape | plastid | 62.79 | 41.22 |
| VIT_03s0063g01030.t01 | Wine grape | cytosol | 61.63 | 29.36 |
| VIT_00s0179g00290.t01 | Wine grape | endoplasmic reticulum, golgi | 67.44 | 15.96 |
| VIT_04s0008g05090.t01 | Wine grape | nucleus | 58.14 | 12.56 |
Protein Annotations
| EntrezGene:100267506 | wikigene:100267506 | MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A5BQN6 | EMBL:AM467727 |
| ProteinID:CAN77164 | ProteinID:CAN77164.1 | ProteinID:CCB60643 | ProteinID:CCB60643.1 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase |
| InterPro:Cyclophilin-type_PPIase_CS | InterPro:Cyclophilin-type_PPIase_dom | EMBL:FN596508 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0006457 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR002130 | InterPro:IPR029000 | EntrezGene:LOC100267506 | wikigene:LOC100267506 |
| PFAM:PF00160 | PIRSF:PIRSF001467 | PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 |
| PANTHER:PTHR11071:SF382 | SUPFAM:SSF50891 | TIGR:TC52780 | UniParc:UPI000152164B | ArrayExpress:VIT_03s0038g01930 | EnsemblPlantsGene:VIT_03s0038g01930 |
| EnsemblPlants:VIT_03s0038g01930.t01 | unigene:Vvi.11217 | unigene:Vvi.7462 | RefSeq:XP_003631573 | RefSeq:XP_003631573.1 | SEG:seg |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A5BQN6]
Coordinates
chr3:+:1347905..1348611
Molecular Weight (calculated)
18313.8 Da
IEP (calculated)
7.970
GRAVY (calculated)
-0.250
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNPRVFFDV SIGGAPAGRI VMELYADTTP RTAENFRALC TGEKGVGRSG KPLHFKGSIF HRVIPSFMCQ GGDFTRGDGT GGESIYGAKF EDENFIKKHT
101: GPGILSMANA GPGTNGSQFF ICTDKTEWLD GKHVVFGQVV EGMDVVKAVE KVGSGSGRTA KTVKIEDCGQ LS
101: GPGILSMANA GPGTNGSQFF ICTDKTEWLD GKHVVFGQVV EGMDVVKAVE KVGSGSGRTA KTVKIEDCGQ LS
001: MSNPRVFFDM SLSGTPIGRI EMELFADTTP NTAENFRALC TGEKGMGKLG KPLHFKGSIF HRVIPGFMCQ GGDFTAKNGT GGESIYGAKF KDENFIKKHT
101: GAGILSMANS GPNTNGSQFF ICTDKTSWLD GKHVVFGQVV KGLDVVKAIE KVGSDSGKTS KVVTITDCGQ LS
101: GAGILSMANS GPNTNGSQFF ICTDKTSWLD GKHVVFGQVV KGLDVVKAIE KVGSDSGKTS KVVTITDCGQ LS
Arabidopsis Description
CYP18-4Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UWH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.