Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G068900.1 | Wheat | cytosol | 81.55 | 98.25 |
| TraesCS6B01G093100.2 | Wheat | cytosol | 81.55 | 98.25 |
| TraesCS6D01G066700.1 | Wheat | golgi, plastid | 81.55 | 98.25 |
| Os02t0121300-01 | Rice | extracellular | 72.33 | 86.63 |
| KRH60719 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 69.42 | 83.14 |
| Bra010728.1-P | Field mustard | cytosol | 69.42 | 83.14 |
| CDY12100 | Canola | cytosol | 69.42 | 83.14 |
| CDX90292 | Canola | cytosol | 69.42 | 83.14 |
| KRH51416 | Soybean | cytosol | 68.93 | 82.56 |
| KRH24153 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 68.45 | 81.98 |
| CDY47469 | Canola | cytosol | 67.96 | 81.87 |
| Bra037296.1-P | Field mustard | cytosol | 67.96 | 81.87 |
| KRH29120 | Soybean | endoplasmic reticulum, nucleus | 67.96 | 81.4 |
| VIT_18s0001g14400.t01 | Wine grape | extracellular | 67.96 | 81.4 |
| CDY26779 | Canola | cytosol | 67.48 | 81.29 |
| Solyc01g111170.2.1 | Tomato | extracellular, nucleus | 66.99 | 80.7 |
| CDX69094 | Canola | cytosol | 66.99 | 80.23 |
| Solyc10g054910.1.1 | Tomato | extracellular, unclear | 66.99 | 80.23 |
| PGSC0003DMT400011344 | Potato | cytosol | 66.99 | 80.23 |
| Bra011568.1-P | Field mustard | cytosol | 66.5 | 80.12 |
| VIT_03s0038g01930.t01 | Wine grape | cytosol | 66.5 | 79.65 |
| AT4G38740.1 | Thale cress | cytosol | 66.5 | 79.65 |
| GSMUA_Achr3P12630_001 | Banana | plasma membrane, unclear | 58.25 | 79.47 |
| CDY22414 | Canola | cytosol, extracellular | 66.02 | 79.07 |
| Bra033574.1-P | Field mustard | cytosol | 66.02 | 79.07 |
| CDX72741 | Canola | cytosol | 66.02 | 79.07 |
| PGSC0003DMT400004125 | Potato | extracellular | 65.53 | 78.95 |
| AT2G16600.1 | Thale cress | cytosol | 66.02 | 78.61 |
| AT2G21130.1 | Thale cress | cytosol | 66.02 | 78.16 |
| AT4G34870.1 | Thale cress | cytosol | 62.62 | 75.0 |
| HORVU6Hr1G092950.1 | Barley | endoplasmic reticulum, golgi | 67.96 | 74.07 |
| HORVU4Hr1G000910.3 | Barley | cytosol | 61.65 | 63.82 |
| HORVU6Hr1G050970.4 | Barley | cytosol, endoplasmic reticulum | 57.77 | 55.09 |
| HORVU7Hr1G095720.2 | Barley | mitochondrion | 56.8 | 53.67 |
| HORVU5Hr1G111410.1 | Barley | plastid | 48.06 | 50.0 |
| HORVU5Hr1G083310.3 | Barley | endoplasmic reticulum | 47.57 | 45.37 |
| HORVU3Hr1G030750.1 | Barley | plastid | 49.03 | 42.08 |
| HORVU1Hr1G000710.1 | Barley | mitochondrion, plastid | 54.37 | 39.86 |
| HORVU7Hr1G036160.1 | Barley | cytosol | 53.88 | 29.21 |
| HORVU6Hr1G077290.1 | Barley | plastid | 51.94 | 23.52 |
| HORVU2Hr1G056230.1 | Barley | nucleus | 48.06 | 15.97 |
| HORVU6Hr1G037500.21 | Barley | nucleus | 45.15 | 11.3 |
Protein Annotations
| MapMan:18.12.1 | Gene3D:2.40.100.10 | UniProt:A0A287TCE0 | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_CS |
| InterPro:Cyclophilin-type_PPIase_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006457 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU6Hr1G012570 | EnsemblPlants:HORVU6Hr1G012570.2 | InterPro:IPR002130 | InterPro:IPR029000 | PFAM:PF00160 | PIRSF:PIRSF001467 |
| PRINTS:PR00153 | ScanProsite:PS00170 | PFscan:PS50072 | PANTHER:PTHR11071 | PANTHER:PTHR11071:SF403 | SUPFAM:SSF50891 |
| UniParc:UPI000B485253 | SEG:seg | : | : | : | : |
Description
Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287TCE0]
Coordinates
chrchr6H:+:24667324..24684418
Molecular Weight (calculated)
22180.8 Da
IEP (calculated)
8.376
GRAVY (calculated)
-0.250
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: RSQSPKPEEI PIRAPEFPIS PKTLAPIPIP IPASEMANPK VFFDMTVGGA PAGRIVMELY KDAVPRTVEN FRALCTGEKG VGKSGKPLHY KGSSFHRVIP
101: DFMCQGGDFT RGNGTGGESI YGEKFADEKF IHKHTKPGIL SMANAGPNTN GSQFFICTVP CNWLDGKHVV FGEVVEGMDV VKNIEKVGSR SGTCSKQVVI
201: ADCGQL
101: DFMCQGGDFT RGNGTGGESI YGEKFADEKF IHKHTKPGIL SMANAGPNTN GSQFFICTVP CNWLDGKHVV FGEVVEGMDV VKNIEKVGSR SGTCSKQVVI
201: ADCGQL
001: MASHPKVFFD MTIGGAPAGK IVMELYTDKT PKTAENFRAL CTGEKGVGRS GKPLHFKGSS FHRVIPNFMC QGGDFTKGNG TGGESIYGAK FEDENFERKH
101: TGPGILSMAN AGANTNGSQF FICTVKTDWL DGKHVVFGQV VEGLDVVKAI EKIGSSSGKP TKPVVIADCG EISS
101: TGPGILSMAN AGANTNGSQF FICTVKTDWL DGKHVVFGQV VEGLDVVKAI EKIGSSSGKP TKPVVIADCG EISS
Arabidopsis Description
CYP19-2Peptidyl-prolyl cis-trans isomerase CYP19-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.