Factsheet for HORVU4Hr1G000910.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56070.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT3G56070.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT3G56070.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT3G56070.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT3G56070.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT3G56070.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT3G56070.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT3G56070.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G001600.1	Wheat	mitochondrion	85.93	95.53
TraesCS4A01G312600.1	Wheat	cytosol, mitochondrion, plastid	82.91	91.67
EER96387	Sorghum	cytosol	73.37	83.43
Os09t0571400-01	Rice	mitochondrion	72.86	81.01
KRH68802	Soybean	cytosol	70.35	80.0
KRG97056	Soybean	cytosol	69.35	78.86
AT3G56070.1	Thale cress	cytosol	68.34	77.27
VIT_14s0081g00700.t01	Wine grape	cytosol	67.34	77.01
PGSC0003DMT400073838	Potato	cytosol	66.83	76.0
Bra007214.1-P	Field mustard	cytosol	68.84	75.27
CDY27248	Canola	cytosol	68.84	75.27
CDX72175	Canola	cytosol	68.84	74.86
Solyc11g006070.1.1	Tomato	cytosol, extracellular, unclear	56.28	73.2
HORVU6Hr1G012570.2	Barley	cytosol	63.82	61.65
HORVU6Hr1G092950.1	Barley	endoplasmic reticulum, golgi	58.29	61.38
HORVU6Hr1G050970.4	Barley	cytosol, endoplasmic reticulum	57.29	52.78
HORVU7Hr1G095720.2	Barley	mitochondrion	57.79	52.75
HORVU5Hr1G111410.1	Barley	plastid	49.75	50.0
HORVU5Hr1G083310.3	Barley	endoplasmic reticulum	47.24	43.52
HORVU3Hr1G030750.1	Barley	plastid	51.26	42.5
HORVU1Hr1G000710.1	Barley	mitochondrion, plastid	52.76	37.37
HORVU7Hr1G036160.1	Barley	cytosol	54.77	28.68
HORVU6Hr1G077290.1	Barley	plastid	52.26	22.86
HORVU2Hr1G056230.1	Barley	nucleus	50.25	16.13
HORVU6Hr1G037500.21	Barley	nucleus	46.73	11.3

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	UniProt:A0A287MWF4	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase	InterPro:Cyclophilin-type_PPIase_CS
InterPro:Cyclophilin-type_PPIase_dom	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005794	GO:GO:0006457
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
GO:GO:0046686	EnsemblPlantsGene:HORVU4Hr1G000910	EnsemblPlants:HORVU4Hr1G000910.3	InterPro:IPR002130	InterPro:IPR029000	PFAM:PF00160
PIRSF:PIRSF001467	PRINTS:PR00153	ScanProsite:PS00170	PFscan:PS50072	PANTHER:PTHR11071	PANTHER:PTHR11071:SF403
SUPFAM:SSF50891	UniParc:UPI000B487227	SEG:seg	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287MWF4]

Coordinates

chrchr4H:+:1336064..1336786

Molecular Weight (calculated)

21368.6 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.279

Length

199 amino acids

Sequence
(BLAST)

001: MRVEERKKEA IFDLLDRQQH QVAMAAKNPK VFFDILIGQA KAGRVVMELY ADKVPRTAAN FRQLCTGEAG KGKSGKPLHY KGSPFHRIIP GFMCQGGDFT
101: RGNGTGGESV YGEKFADENF LLRHTGPGVL SMANAGPGTN GSQFFICTAK TPWLDGKHVV FGQVVDGYGV VEKMEAVGSS GGATAQPVVI EDCGQLADE

Best Arabidopsis Sequence Match ( AT3G56070.2 )
(BLAST)

001: MANPKVFFDI LIGKMKAGRV VMELFADVTP RTANNFRALC TGENGIGKAG KALHYKGSAF HRIIPGFMCQ GGDFTRGNGT GGESIYGSKF EDENFKLKHT
101: GPGILSMANS GPNTNGSQFF ICTEKTSWLD GKHVVFGKVV DGYNVVKAME DVGSDMGNPS ERVVIEDCGE LKNPSS

Arabidopsis Description

CYP19-3Peptidyl-prolyl cis-trans isomerase CYP19-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38867]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.